Gene : Bradi1g61890 B. distachyon v3.1
Defline:  (1 of 1) PTHR12277:SF51 - ALPHA/BETA HYDROLASE FOLD-1 DOMAIN-CONTAINING PROTEIN Genomic Order:  7837
Name:  ? Bradi1g61890 Secondary Identifier:  ? PAC:32795859
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon LIPAS-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-7420 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g61890 0.5kb upstream 0.5kb upstream 9987 true Bd1: 61395970-61405956 Brachypodium distachyon
Bradi1g61890 0.5kb upstream 0.5kb upstream 500 false Bd1: 61395970-61396469 Brachypodium distachyon
Bradi1g61890 0.5kb downstream 0.5kb downstream 9987 true Bd1: 61396470-61406456 Brachypodium distachyon
Bradi1g61890 0.5kb downstream 0.5kb downstream 500 false Bd1: 61405957-61406456 Brachypodium distachyon
Bradi1g61890 1.0kb upstream 1.0kb upstream 10487 true Bd1: 61395470-61405956 Brachypodium distachyon
Bradi1g61890 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61395470-61396469 Brachypodium distachyon
Bradi1g61890 1.0kb downstream 1.0kb downstream 10487 true Bd1: 61396470-61406956 Brachypodium distachyon
Bradi1g61890 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61405957-61406956 Brachypodium distachyon
Bradi1g61890 2.0kb upstream 2.0kb upstream 11487 true Bd1: 61394470-61405956 Brachypodium distachyon
Bradi1g61890 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61394470-61396469 Brachypodium distachyon
Bradi1g61890 2.0kb downstream 2.0kb downstream 11487 true Bd1: 61396470-61407956 Brachypodium distachyon
Bradi1g61890 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61405957-61407956 Brachypodium distachyon
Bradi1g61890 5.0kb upstream 5.0kb upstream 14487 true Bd1: 61391470-61405956 Brachypodium distachyon
Bradi1g61890 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61391470-61396469 Brachypodium distachyon
Bradi1g61890 5.0kb downstream 5.0kb downstream 14487 true Bd1: 61396470-61410956 Brachypodium distachyon
Bradi1g61890 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61405957-61410956 Brachypodium distachyon
Bradi1g61890 10.0kb upstream 10.0kb upstream 19487 true Bd1: 61386470-61405956 Brachypodium distachyon
Bradi1g61890 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61386470-61396469 Brachypodium distachyon
Bradi1g61890 10.0kb downstream 10.0kb downstream 19487 true Bd1: 61396470-61415956 Brachypodium distachyon
Bradi1g61890 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61405957-61415956 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575642 5269 Grass View MSA
122047952 5273 Angiosperm View MSA
121347410 5274 Embryophyte View MSA
123427961 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.709        
cufflinks 2.069        
cufflinks 3.307       High
cufflinks 1.985        
cufflinks 2.385        
cufflinks 1.689        
cufflinks 1.515       Low
cufflinks 1.721        
cufflinks 1.744        
cufflinks 3.3       High
cufflinks 2.871        
cufflinks 1.765        
cufflinks 2.266        
cufflinks 2.015        
cufflinks 2.014        
cufflinks 1.893        
cufflinks 1.697        
cufflinks 3.725       High
cufflinks 2.327        
cufflinks 2.064        
cufflinks 2.351        
cufflinks 3.474       High
cufflinks 1.729        
cufflinks 1.701        
cufflinks 1.49       Low
cufflinks 3.368       High
cufflinks 2.872        
cufflinks 3.648       High
cufflinks 3.13       High
cufflinks 2.139        

0 Strain