Gene : Bradi1g66870 B. distachyon v3.1
Defline:  (1 of 1) K13171 - serine/arginine repetitive matrix protein 1 (SRRM1, SRM160) Genomic Order:  8450
Name:  ? Bradi1g66870 Secondary Identifier:  ? PAC:32802785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g66870 0.5kb upstream 0.5kb upstream 9830 true Bd1: 65835296-65845125 Brachypodium distachyon
Bradi1g66870 0.5kb upstream 0.5kb upstream 500 false Bd1: 65835296-65835795 Brachypodium distachyon
Bradi1g66870 0.5kb downstream 0.5kb downstream 9830 true Bd1: 65835796-65845625 Brachypodium distachyon
Bradi1g66870 0.5kb downstream 0.5kb downstream 500 false Bd1: 65845126-65845625 Brachypodium distachyon
Bradi1g66870 1.0kb upstream 1.0kb upstream 10330 true Bd1: 65834796-65845125 Brachypodium distachyon
Bradi1g66870 1.0kb upstream 1.0kb upstream 1000 false Bd1: 65834796-65835795 Brachypodium distachyon
Bradi1g66870 1.0kb downstream 1.0kb downstream 10330 true Bd1: 65835796-65846125 Brachypodium distachyon
Bradi1g66870 1.0kb downstream 1.0kb downstream 1000 false Bd1: 65845126-65846125 Brachypodium distachyon
Bradi1g66870 2.0kb upstream 2.0kb upstream 11330 true Bd1: 65833796-65845125 Brachypodium distachyon
Bradi1g66870 2.0kb upstream 2.0kb upstream 2000 false Bd1: 65833796-65835795 Brachypodium distachyon
Bradi1g66870 2.0kb downstream 2.0kb downstream 11330 true Bd1: 65835796-65847125 Brachypodium distachyon
Bradi1g66870 2.0kb downstream 2.0kb downstream 2000 false Bd1: 65845126-65847125 Brachypodium distachyon
Bradi1g66870 5.0kb upstream 5.0kb upstream 14330 true Bd1: 65830796-65845125 Brachypodium distachyon
Bradi1g66870 5.0kb upstream 5.0kb upstream 5000 false Bd1: 65830796-65835795 Brachypodium distachyon
Bradi1g66870 5.0kb downstream 5.0kb downstream 14330 true Bd1: 65835796-65850125 Brachypodium distachyon
Bradi1g66870 5.0kb downstream 5.0kb downstream 5000 false Bd1: 65845126-65850125 Brachypodium distachyon
Bradi1g66870 10.0kb upstream 10.0kb upstream 19330 true Bd1: 65825796-65845125 Brachypodium distachyon
Bradi1g66870 10.0kb upstream 10.0kb upstream 10000 false Bd1: 65825796-65835795 Brachypodium distachyon
Bradi1g66870 10.0kb downstream 10.0kb downstream 19330 true Bd1: 65835796-65855125 Brachypodium distachyon
Bradi1g66870 10.0kb downstream 10.0kb downstream 10000 false Bd1: 65845126-65855125 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580940 5269 Grass View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.39        
cufflinks 4.265        
cufflinks 4.659        
cufflinks 3.223        
cufflinks 1.962       Low
cufflinks 3.931        
cufflinks 3.6        
cufflinks 3.281        
cufflinks 3.818        
cufflinks 3.253        
cufflinks 3.218        
cufflinks 3.766        
cufflinks 2.752        
cufflinks 2.323        
cufflinks 2.41        
cufflinks 4.094        
cufflinks 2.376        
cufflinks 5.988       High
cufflinks 2.838        
cufflinks 1.872       Low
cufflinks 2.872        
cufflinks 4.77       High
cufflinks 3.2        
cufflinks 3.216        
cufflinks 3.196        
cufflinks 4.269        
cufflinks 3.378        
cufflinks 4.312        
cufflinks 4.006        
cufflinks 4.264        

0 Strain