Gene : Bradi1g67140 B. distachyon v3.1
Defline:  (1 of 2) PF00018 - SH3 domain (SH3_1) Genomic Order:  8490
Name:  ? Bradi1g67140 Secondary Identifier:  ? PAC:32806023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g67140 0.5kb upstream 0.5kb upstream 14003 true Bd1: 66056420-66070422 Brachypodium distachyon
Bradi1g67140 0.5kb upstream 0.5kb upstream 500 false Bd1: 66069923-66070422 Brachypodium distachyon
Bradi1g67140 0.5kb downstream 0.5kb downstream 14003 true Bd1: 66055920-66069922 Brachypodium distachyon
Bradi1g67140 0.5kb downstream 0.5kb downstream 500 false Bd1: 66055920-66056419 Brachypodium distachyon
Bradi1g67140 1.0kb upstream 1.0kb upstream 14503 true Bd1: 66056420-66070922 Brachypodium distachyon
Bradi1g67140 1.0kb upstream 1.0kb upstream 1000 false Bd1: 66069923-66070922 Brachypodium distachyon
Bradi1g67140 1.0kb downstream 1.0kb downstream 14503 true Bd1: 66055420-66069922 Brachypodium distachyon
Bradi1g67140 1.0kb downstream 1.0kb downstream 1000 false Bd1: 66055420-66056419 Brachypodium distachyon
Bradi1g67140 2.0kb upstream 2.0kb upstream 15503 true Bd1: 66056420-66071922 Brachypodium distachyon
Bradi1g67140 2.0kb upstream 2.0kb upstream 2000 false Bd1: 66069923-66071922 Brachypodium distachyon
Bradi1g67140 2.0kb downstream 2.0kb downstream 15503 true Bd1: 66054420-66069922 Brachypodium distachyon
Bradi1g67140 2.0kb downstream 2.0kb downstream 2000 false Bd1: 66054420-66056419 Brachypodium distachyon
Bradi1g67140 5.0kb upstream 5.0kb upstream 18503 true Bd1: 66056420-66074922 Brachypodium distachyon
Bradi1g67140 5.0kb upstream 5.0kb upstream 5000 false Bd1: 66069923-66074922 Brachypodium distachyon
Bradi1g67140 5.0kb downstream 5.0kb downstream 18503 true Bd1: 66051420-66069922 Brachypodium distachyon
Bradi1g67140 5.0kb downstream 5.0kb downstream 5000 false Bd1: 66051420-66056419 Brachypodium distachyon
Bradi1g67140 10.0kb upstream 10.0kb upstream 23503 true Bd1: 66056420-66079922 Brachypodium distachyon
Bradi1g67140 10.0kb upstream 10.0kb upstream 10000 false Bd1: 66069923-66079922 Brachypodium distachyon
Bradi1g67140 10.0kb downstream 10.0kb downstream 23503 true Bd1: 66046420-66069922 Brachypodium distachyon
Bradi1g67140 10.0kb downstream 10.0kb downstream 10000 false Bd1: 66046420-66056419 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581818 5269 Grass View MSA
122044130 5273 Angiosperm View MSA
121348962 5274 Embryophyte View MSA
123428583 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.113        
cufflinks 8.724        
cufflinks 9.094        
cufflinks 6.395        
cufflinks 2.529       Low
cufflinks 7.603        
cufflinks 6.739        
cufflinks 5.849        
cufflinks 7.128        
cufflinks 3.573        
cufflinks 4.852        
cufflinks 7.477        
cufflinks 3.264        
cufflinks 2.916        
cufflinks 3.439        
cufflinks 8.71        
cufflinks 4.596        
cufflinks 14.348     High High
cufflinks 6.934        
cufflinks 1.885       Low
cufflinks 8.63        
cufflinks 8.406        
cufflinks 5.749        
cufflinks 6.601        
cufflinks 5.806        
cufflinks 7.224        
cufflinks 4.08        
cufflinks 6.778        
cufflinks 6.631        
cufflinks 11.241       High

0 Strain