Gene : Bradi1g67160 B. distachyon v3.1
Defline:  (1 of 3) PTHR24006:SF428 - CORONATINE-INSENSITIVE PROTEIN 1 Genomic Order:  8494
Name:  ? Bradi1g67160 Secondary Identifier:  ? PAC:32806713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g67160 0.5kb upstream 0.5kb upstream 3907 true Bd1: 66081926-66085832 Brachypodium distachyon
Bradi1g67160 0.5kb upstream 0.5kb upstream 500 false Bd1: 66085333-66085832 Brachypodium distachyon
Bradi1g67160 0.5kb downstream 0.5kb downstream 3907 true Bd1: 66081426-66085332 Brachypodium distachyon
Bradi1g67160 0.5kb downstream 0.5kb downstream 500 false Bd1: 66081426-66081925 Brachypodium distachyon
Bradi1g67160 1.0kb upstream 1.0kb upstream 4407 true Bd1: 66081926-66086332 Brachypodium distachyon
Bradi1g67160 1.0kb upstream 1.0kb upstream 1000 false Bd1: 66085333-66086332 Brachypodium distachyon
Bradi1g67160 1.0kb downstream 1.0kb downstream 4407 true Bd1: 66080926-66085332 Brachypodium distachyon
Bradi1g67160 1.0kb downstream 1.0kb downstream 1000 false Bd1: 66080926-66081925 Brachypodium distachyon
Bradi1g67160 2.0kb upstream 2.0kb upstream 5407 true Bd1: 66081926-66087332 Brachypodium distachyon
Bradi1g67160 2.0kb upstream 2.0kb upstream 2000 false Bd1: 66085333-66087332 Brachypodium distachyon
Bradi1g67160 2.0kb downstream 2.0kb downstream 5407 true Bd1: 66079926-66085332 Brachypodium distachyon
Bradi1g67160 2.0kb downstream 2.0kb downstream 2000 false Bd1: 66079926-66081925 Brachypodium distachyon
Bradi1g67160 5.0kb upstream 5.0kb upstream 8407 true Bd1: 66081926-66090332 Brachypodium distachyon
Bradi1g67160 5.0kb upstream 5.0kb upstream 5000 false Bd1: 66085333-66090332 Brachypodium distachyon
Bradi1g67160 5.0kb downstream 5.0kb downstream 8407 true Bd1: 66076926-66085332 Brachypodium distachyon
Bradi1g67160 5.0kb downstream 5.0kb downstream 5000 false Bd1: 66076926-66081925 Brachypodium distachyon
Bradi1g67160 10.0kb upstream 10.0kb upstream 13407 true Bd1: 66081926-66095332 Brachypodium distachyon
Bradi1g67160 10.0kb upstream 10.0kb upstream 10000 false Bd1: 66085333-66095332 Brachypodium distachyon
Bradi1g67160 10.0kb downstream 10.0kb downstream 13407 true Bd1: 66071926-66085332 Brachypodium distachyon
Bradi1g67160 10.0kb downstream 10.0kb downstream 10000 false Bd1: 66071926-66081925 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589460 5269 Grass View MSA
122042626 5273 Angiosperm View MSA
121349676 5274 Embryophyte View MSA
123381396 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.847     High  
cufflinks 26.574     High  
cufflinks 24.101     High  
cufflinks 16.126     High  
cufflinks 7.481       Low
cufflinks 28.594     High  
cufflinks 30.709     High High
cufflinks 13.331     High  
cufflinks 19.737     High  
cufflinks 11.624     High  
cufflinks 23.694     High  
cufflinks 22.73     High  
cufflinks 22.671     High  
cufflinks 19.073     High  
cufflinks 13.754     High  
cufflinks 31.748     High High
cufflinks 11.236     High  
cufflinks 28.499     High  
cufflinks 13.129     High  
cufflinks 6.198       Low
cufflinks 18.226     High  
cufflinks 17.765     High  
cufflinks 12.055     High  
cufflinks 18.774     High  
cufflinks 23.479     High  
cufflinks 20.297     High  
cufflinks 29.635     High High
cufflinks 19.289     High  
cufflinks 16.536     High  
cufflinks 29.092     High High

0 Strain