Gene : Bradi1g67320 B. distachyon v3.1
Defline:  (1 of 1) K12826 - splicing factor 3A subunit 2 (SF3A2, SAP62) Genomic Order:  8513
Name:  ? Bradi1g67320 Secondary Identifier:  ? PAC:32803003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g67320 0.5kb upstream 0.5kb upstream 4031 true Bd1: 66187058-66191088 Brachypodium distachyon
Bradi1g67320 0.5kb upstream 0.5kb upstream 500 false Bd1: 66187058-66187557 Brachypodium distachyon
Bradi1g67320 0.5kb downstream 0.5kb downstream 4031 true Bd1: 66187558-66191588 Brachypodium distachyon
Bradi1g67320 0.5kb downstream 0.5kb downstream 500 false Bd1: 66191089-66191588 Brachypodium distachyon
Bradi1g67320 1.0kb upstream 1.0kb upstream 4531 true Bd1: 66186558-66191088 Brachypodium distachyon
Bradi1g67320 1.0kb upstream 1.0kb upstream 1000 false Bd1: 66186558-66187557 Brachypodium distachyon
Bradi1g67320 1.0kb downstream 1.0kb downstream 4531 true Bd1: 66187558-66192088 Brachypodium distachyon
Bradi1g67320 1.0kb downstream 1.0kb downstream 1000 false Bd1: 66191089-66192088 Brachypodium distachyon
Bradi1g67320 2.0kb upstream 2.0kb upstream 5531 true Bd1: 66185558-66191088 Brachypodium distachyon
Bradi1g67320 2.0kb upstream 2.0kb upstream 2000 false Bd1: 66185558-66187557 Brachypodium distachyon
Bradi1g67320 2.0kb downstream 2.0kb downstream 5531 true Bd1: 66187558-66193088 Brachypodium distachyon
Bradi1g67320 2.0kb downstream 2.0kb downstream 2000 false Bd1: 66191089-66193088 Brachypodium distachyon
Bradi1g67320 5.0kb upstream 5.0kb upstream 8531 true Bd1: 66182558-66191088 Brachypodium distachyon
Bradi1g67320 5.0kb upstream 5.0kb upstream 5000 false Bd1: 66182558-66187557 Brachypodium distachyon
Bradi1g67320 5.0kb downstream 5.0kb downstream 8531 true Bd1: 66187558-66196088 Brachypodium distachyon
Bradi1g67320 5.0kb downstream 5.0kb downstream 5000 false Bd1: 66191089-66196088 Brachypodium distachyon
Bradi1g67320 10.0kb upstream 10.0kb upstream 13531 true Bd1: 66177558-66191088 Brachypodium distachyon
Bradi1g67320 10.0kb upstream 10.0kb upstream 10000 false Bd1: 66177558-66187557 Brachypodium distachyon
Bradi1g67320 10.0kb downstream 10.0kb downstream 13531 true Bd1: 66187558-66201088 Brachypodium distachyon
Bradi1g67320 10.0kb downstream 10.0kb downstream 10000 false Bd1: 66191089-66201088 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586979 5269 Grass View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.891     High  
cufflinks 11.005     High  
cufflinks 10.678     High  
cufflinks 8.924        
cufflinks 6.967       Low
cufflinks 9.634     High  
cufflinks 12.37     High  
cufflinks 10.225     High  
cufflinks 9.757     High  
cufflinks 8.139        
cufflinks 8.248        
cufflinks 7.757        
cufflinks 6.955       Low
cufflinks 7.511        
cufflinks 6.321       Low
cufflinks 10.862     High  
cufflinks 11.444     High  
cufflinks 15.723     High High
cufflinks 17.041     High High
cufflinks 6.895       Low
cufflinks 10.823        
cufflinks 9.612        
cufflinks 9.646     High  
cufflinks 8.478        
cufflinks 9.388        
cufflinks 8.944        
cufflinks 9.335     High  
cufflinks 9.845        
cufflinks 10.046        
cufflinks 9.623        

0 Strain