Gene : Bradi1g67540 B. distachyon v3.1
Defline:  (1 of 1) PTHR13677:SF0 - PROTEIN F53H1.3, ISOFORM A Genomic Order:  8538
Name:  ? Bradi1g67540 Secondary Identifier:  ? PAC:32795834
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g67540 0.5kb upstream 0.5kb upstream 5852 true Bd1: 66402487-66408338 Brachypodium distachyon
Bradi1g67540 0.5kb upstream 0.5kb upstream 500 false Bd1: 66402487-66402986 Brachypodium distachyon
Bradi1g67540 0.5kb downstream 0.5kb downstream 5852 true Bd1: 66402987-66408838 Brachypodium distachyon
Bradi1g67540 0.5kb downstream 0.5kb downstream 500 false Bd1: 66408339-66408838 Brachypodium distachyon
Bradi1g67540 1.0kb upstream 1.0kb upstream 6352 true Bd1: 66401987-66408338 Brachypodium distachyon
Bradi1g67540 1.0kb upstream 1.0kb upstream 1000 false Bd1: 66401987-66402986 Brachypodium distachyon
Bradi1g67540 1.0kb downstream 1.0kb downstream 6352 true Bd1: 66402987-66409338 Brachypodium distachyon
Bradi1g67540 1.0kb downstream 1.0kb downstream 1000 false Bd1: 66408339-66409338 Brachypodium distachyon
Bradi1g67540 2.0kb upstream 2.0kb upstream 7352 true Bd1: 66400987-66408338 Brachypodium distachyon
Bradi1g67540 2.0kb upstream 2.0kb upstream 2000 false Bd1: 66400987-66402986 Brachypodium distachyon
Bradi1g67540 2.0kb downstream 2.0kb downstream 7352 true Bd1: 66402987-66410338 Brachypodium distachyon
Bradi1g67540 2.0kb downstream 2.0kb downstream 2000 false Bd1: 66408339-66410338 Brachypodium distachyon
Bradi1g67540 5.0kb upstream 5.0kb upstream 10352 true Bd1: 66397987-66408338 Brachypodium distachyon
Bradi1g67540 5.0kb upstream 5.0kb upstream 5000 false Bd1: 66397987-66402986 Brachypodium distachyon
Bradi1g67540 5.0kb downstream 5.0kb downstream 10352 true Bd1: 66402987-66413338 Brachypodium distachyon
Bradi1g67540 5.0kb downstream 5.0kb downstream 5000 false Bd1: 66408339-66413338 Brachypodium distachyon
Bradi1g67540 10.0kb upstream 10.0kb upstream 15352 true Bd1: 66392987-66408338 Brachypodium distachyon
Bradi1g67540 10.0kb upstream 10.0kb upstream 10000 false Bd1: 66392987-66402986 Brachypodium distachyon
Bradi1g67540 10.0kb downstream 10.0kb downstream 15352 true Bd1: 66402987-66418338 Brachypodium distachyon
Bradi1g67540 10.0kb downstream 10.0kb downstream 10000 false Bd1: 66408339-66418338 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573474 5269 Grass View MSA
122046522 5273 Angiosperm View MSA
121346566 5274 Embryophyte View MSA
123427841 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.443        
cufflinks 1.773        
cufflinks 2.494        
cufflinks 1.565        
cufflinks 0.767       Low
cufflinks 1.829        
cufflinks 1.856        
cufflinks 1.975        
cufflinks 1.628        
cufflinks 2.002        
cufflinks 1.685        
cufflinks 1.97        
cufflinks 1.632        
cufflinks 1.438        
cufflinks 1.329        
cufflinks 1.984        
cufflinks 2.316        
cufflinks 2.874       High
cufflinks 2.995       High
cufflinks 0.221       Low
cufflinks 2.438        
cufflinks 2.737        
cufflinks 1.624        
cufflinks 1.469        
cufflinks 1.563        
cufflinks 2.253        
cufflinks 2.302        
cufflinks 2.387        
cufflinks 2.305        
cufflinks 2.167        

0 Strain