Gene : Bradi1g68160 B. distachyon v3.1
Defline:  (1 of 1) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  8619
Name:  ? Bradi1g68160 Secondary Identifier:  ? PAC:32804535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g68160 0.5kb upstream 0.5kb upstream 8683 true Bd1: 66890286-66898968 Brachypodium distachyon
Bradi1g68160 0.5kb upstream 0.5kb upstream 500 false Bd1: 66890286-66890785 Brachypodium distachyon
Bradi1g68160 0.5kb downstream 0.5kb downstream 8683 true Bd1: 66890786-66899468 Brachypodium distachyon
Bradi1g68160 0.5kb downstream 0.5kb downstream 500 false Bd1: 66898969-66899468 Brachypodium distachyon
Bradi1g68160 1.0kb upstream 1.0kb upstream 9183 true Bd1: 66889786-66898968 Brachypodium distachyon
Bradi1g68160 1.0kb upstream 1.0kb upstream 1000 false Bd1: 66889786-66890785 Brachypodium distachyon
Bradi1g68160 1.0kb downstream 1.0kb downstream 9183 true Bd1: 66890786-66899968 Brachypodium distachyon
Bradi1g68160 1.0kb downstream 1.0kb downstream 1000 false Bd1: 66898969-66899968 Brachypodium distachyon
Bradi1g68160 2.0kb upstream 2.0kb upstream 10183 true Bd1: 66888786-66898968 Brachypodium distachyon
Bradi1g68160 2.0kb upstream 2.0kb upstream 2000 false Bd1: 66888786-66890785 Brachypodium distachyon
Bradi1g68160 2.0kb downstream 2.0kb downstream 10183 true Bd1: 66890786-66900968 Brachypodium distachyon
Bradi1g68160 2.0kb downstream 2.0kb downstream 2000 false Bd1: 66898969-66900968 Brachypodium distachyon
Bradi1g68160 5.0kb upstream 5.0kb upstream 13183 true Bd1: 66885786-66898968 Brachypodium distachyon
Bradi1g68160 5.0kb upstream 5.0kb upstream 5000 false Bd1: 66885786-66890785 Brachypodium distachyon
Bradi1g68160 5.0kb downstream 5.0kb downstream 13183 true Bd1: 66890786-66903968 Brachypodium distachyon
Bradi1g68160 5.0kb downstream 5.0kb downstream 5000 false Bd1: 66898969-66903968 Brachypodium distachyon
Bradi1g68160 10.0kb upstream 10.0kb upstream 18183 true Bd1: 66880786-66898968 Brachypodium distachyon
Bradi1g68160 10.0kb upstream 10.0kb upstream 10000 false Bd1: 66880786-66890785 Brachypodium distachyon
Bradi1g68160 10.0kb downstream 10.0kb downstream 18183 true Bd1: 66890786-66908968 Brachypodium distachyon
Bradi1g68160 10.0kb downstream 10.0kb downstream 10000 false Bd1: 66898969-66908968 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569271 5269 Grass View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.31        
cufflinks 13.352     High High
cufflinks 11.821     High  
cufflinks 12.402     High  
cufflinks 5.471        
cufflinks 9.835     High  
cufflinks 12.599     High High
cufflinks 7.516        
cufflinks 7.802        
cufflinks 9.817        
cufflinks 7.9        
cufflinks 7.293        
cufflinks 4.564       Low
cufflinks 7.323        
cufflinks 6.655        
cufflinks 11.132     High  
cufflinks 10.557        
cufflinks 2.858       Low
cufflinks 8.393        
cufflinks 2.713       Low
cufflinks 6.567        
cufflinks 8.561        
cufflinks 6.669        
cufflinks 7.934        
cufflinks 10.745     High  
cufflinks 11.577     High  
cufflinks 4.368       Low
cufflinks 10.952     High  
cufflinks 10.083        
cufflinks 9.215        

0 Strain