Gene : Bradi5g11060 B. distachyon v3.1
Defline:  (1 of 2) PTHR11712//PTHR11712:SF286 - POLYKETIDE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1194
Name:  ? Bradi5g11060 Secondary Identifier:  ? PAC:32811284
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon FASYN-ELONG-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-5156 Brachypodium distachyon pathologic  
Bdistachyon PWY-5971 Brachypodium distachyon pathologic  
Bdistachyon PWY-5989 Brachypodium distachyon pathologic  
Bdistachyon PWY-7388 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g11060 0.5kb upstream 0.5kb upstream 6511 true Bd5: 14782161-14788671 Brachypodium distachyon
Bradi5g11060 0.5kb upstream 0.5kb upstream 500 false Bd5: 14782161-14782660 Brachypodium distachyon
Bradi5g11060 0.5kb downstream 0.5kb downstream 6511 true Bd5: 14782661-14789171 Brachypodium distachyon
Bradi5g11060 0.5kb downstream 0.5kb downstream 500 false Bd5: 14788672-14789171 Brachypodium distachyon
Bradi5g11060 1.0kb upstream 1.0kb upstream 7011 true Bd5: 14781661-14788671 Brachypodium distachyon
Bradi5g11060 1.0kb upstream 1.0kb upstream 1000 false Bd5: 14781661-14782660 Brachypodium distachyon
Bradi5g11060 1.0kb downstream 1.0kb downstream 7011 true Bd5: 14782661-14789671 Brachypodium distachyon
Bradi5g11060 1.0kb downstream 1.0kb downstream 1000 false Bd5: 14788672-14789671 Brachypodium distachyon
Bradi5g11060 2.0kb upstream 2.0kb upstream 8011 true Bd5: 14780661-14788671 Brachypodium distachyon
Bradi5g11060 2.0kb upstream 2.0kb upstream 2000 false Bd5: 14780661-14782660 Brachypodium distachyon
Bradi5g11060 2.0kb downstream 2.0kb downstream 8011 true Bd5: 14782661-14790671 Brachypodium distachyon
Bradi5g11060 2.0kb downstream 2.0kb downstream 2000 false Bd5: 14788672-14790671 Brachypodium distachyon
Bradi5g11060 5.0kb upstream 5.0kb upstream 11011 true Bd5: 14777661-14788671 Brachypodium distachyon
Bradi5g11060 5.0kb upstream 5.0kb upstream 5000 false Bd5: 14777661-14782660 Brachypodium distachyon
Bradi5g11060 5.0kb downstream 5.0kb downstream 11011 true Bd5: 14782661-14793671 Brachypodium distachyon
Bradi5g11060 5.0kb downstream 5.0kb downstream 5000 false Bd5: 14788672-14793671 Brachypodium distachyon
Bradi5g11060 10.0kb upstream 10.0kb upstream 16011 true Bd5: 14772661-14788671 Brachypodium distachyon
Bradi5g11060 10.0kb upstream 10.0kb upstream 10000 false Bd5: 14772661-14782660 Brachypodium distachyon
Bradi5g11060 10.0kb downstream 10.0kb downstream 16011 true Bd5: 14782661-14798671 Brachypodium distachyon
Bradi5g11060 10.0kb downstream 10.0kb downstream 10000 false Bd5: 14788672-14798671 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573439 5269 Grass View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.81        
cufflinks 6.344       High
cufflinks 5.572       High
cufflinks 7.854       High
cufflinks 1.52        
cufflinks 3.43        
cufflinks 4.246        
cufflinks 2.335        
cufflinks 2.64        
cufflinks 2.855        
cufflinks 3.742        
cufflinks 2.992        
cufflinks 2.564        
cufflinks 3.316        
cufflinks 2.576        
cufflinks 3.802        
cufflinks 2.17        
cufflinks 0.281       Low
cufflinks 1.213       Low
cufflinks 0.731       Low
cufflinks 1.373        
cufflinks 2.995        
cufflinks 2.143        
cufflinks 2.598        
cufflinks 3.603        
cufflinks 5.064        
cufflinks 2.261        
cufflinks 4.545        
cufflinks 3.942        
cufflinks 2.947        

0 Strain