Gene : Bradi1g68520 B. distachyon v3.1
Defline:  (1 of 1) PTHR12701:SF20 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIG5 Genomic Order:  8677
Name:  ? Bradi1g68520 Secondary Identifier:  ? PAC:32799105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g68520 0.5kb upstream 0.5kb upstream 5094 true Bd1: 67301624-67306717 Brachypodium distachyon
Bradi1g68520 0.5kb upstream 0.5kb upstream 500 false Bd1: 67301624-67302123 Brachypodium distachyon
Bradi1g68520 0.5kb downstream 0.5kb downstream 5094 true Bd1: 67302124-67307217 Brachypodium distachyon
Bradi1g68520 0.5kb downstream 0.5kb downstream 500 false Bd1: 67306718-67307217 Brachypodium distachyon
Bradi1g68520 1.0kb upstream 1.0kb upstream 5594 true Bd1: 67301124-67306717 Brachypodium distachyon
Bradi1g68520 1.0kb upstream 1.0kb upstream 1000 false Bd1: 67301124-67302123 Brachypodium distachyon
Bradi1g68520 1.0kb downstream 1.0kb downstream 5594 true Bd1: 67302124-67307717 Brachypodium distachyon
Bradi1g68520 1.0kb downstream 1.0kb downstream 1000 false Bd1: 67306718-67307717 Brachypodium distachyon
Bradi1g68520 2.0kb upstream 2.0kb upstream 6594 true Bd1: 67300124-67306717 Brachypodium distachyon
Bradi1g68520 2.0kb upstream 2.0kb upstream 2000 false Bd1: 67300124-67302123 Brachypodium distachyon
Bradi1g68520 2.0kb downstream 2.0kb downstream 6594 true Bd1: 67302124-67308717 Brachypodium distachyon
Bradi1g68520 2.0kb downstream 2.0kb downstream 2000 false Bd1: 67306718-67308717 Brachypodium distachyon
Bradi1g68520 5.0kb upstream 5.0kb upstream 9594 true Bd1: 67297124-67306717 Brachypodium distachyon
Bradi1g68520 5.0kb upstream 5.0kb upstream 5000 false Bd1: 67297124-67302123 Brachypodium distachyon
Bradi1g68520 5.0kb downstream 5.0kb downstream 9594 true Bd1: 67302124-67311717 Brachypodium distachyon
Bradi1g68520 5.0kb downstream 5.0kb downstream 5000 false Bd1: 67306718-67311717 Brachypodium distachyon
Bradi1g68520 10.0kb upstream 10.0kb upstream 14594 true Bd1: 67292124-67306717 Brachypodium distachyon
Bradi1g68520 10.0kb upstream 10.0kb upstream 10000 false Bd1: 67292124-67302123 Brachypodium distachyon
Bradi1g68520 10.0kb downstream 10.0kb downstream 14594 true Bd1: 67302124-67316717 Brachypodium distachyon
Bradi1g68520 10.0kb downstream 10.0kb downstream 10000 false Bd1: 67306718-67316717 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569738 5269 Grass View MSA
122042109 5273 Angiosperm View MSA
121344883 5274 Embryophyte View MSA
123380122 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.069        
cufflinks 6.022        
cufflinks 6.462        
cufflinks 8.471        
cufflinks 16.062     High  
cufflinks 5.342       Low
cufflinks 6.423        
cufflinks 6.484        
cufflinks 6.172        
cufflinks 13.486     High  
cufflinks 6.677        
cufflinks 5.23       Low
cufflinks 4.745       Low
cufflinks 5.964        
cufflinks 8.282        
cufflinks 4.949       Low
cufflinks 15.526     High  
cufflinks 8.703        
cufflinks 41.27     High High
cufflinks 55.342     High High
cufflinks 25.367     High High
cufflinks 6.037        
cufflinks 7.696        
cufflinks 7.475        
cufflinks 8.68        
cufflinks 10.275        
cufflinks 5.847        
cufflinks 10.07        
cufflinks 8.395        
cufflinks 10.225        

0 Strain