Gene : Bradi5g10980 B. distachyon v3.1
Defline:  (1 of 2) K14826 - FK506-binding nuclear protein [EC:5.2.1.8] (FPR3_4) Genomic Order:  1185
Name:  ? Bradi5g10980 Secondary Identifier:  ? PAC:32807085
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10980 0.5kb upstream 0.5kb upstream 4723 true Bd5: 14734058-14738780 Brachypodium distachyon
Bradi5g10980 0.5kb upstream 0.5kb upstream 500 false Bd5: 14738281-14738780 Brachypodium distachyon
Bradi5g10980 0.5kb downstream 0.5kb downstream 4723 true Bd5: 14733558-14738280 Brachypodium distachyon
Bradi5g10980 0.5kb downstream 0.5kb downstream 500 false Bd5: 14733558-14734057 Brachypodium distachyon
Bradi5g10980 1.0kb upstream 1.0kb upstream 5223 true Bd5: 14734058-14739280 Brachypodium distachyon
Bradi5g10980 1.0kb upstream 1.0kb upstream 1000 false Bd5: 14738281-14739280 Brachypodium distachyon
Bradi5g10980 1.0kb downstream 1.0kb downstream 5223 true Bd5: 14733058-14738280 Brachypodium distachyon
Bradi5g10980 1.0kb downstream 1.0kb downstream 1000 false Bd5: 14733058-14734057 Brachypodium distachyon
Bradi5g10980 2.0kb upstream 2.0kb upstream 6223 true Bd5: 14734058-14740280 Brachypodium distachyon
Bradi5g10980 2.0kb upstream 2.0kb upstream 2000 false Bd5: 14738281-14740280 Brachypodium distachyon
Bradi5g10980 2.0kb downstream 2.0kb downstream 6223 true Bd5: 14732058-14738280 Brachypodium distachyon
Bradi5g10980 2.0kb downstream 2.0kb downstream 2000 false Bd5: 14732058-14734057 Brachypodium distachyon
Bradi5g10980 5.0kb upstream 5.0kb upstream 9223 true Bd5: 14734058-14743280 Brachypodium distachyon
Bradi5g10980 5.0kb upstream 5.0kb upstream 5000 false Bd5: 14738281-14743280 Brachypodium distachyon
Bradi5g10980 5.0kb downstream 5.0kb downstream 9223 true Bd5: 14729058-14738280 Brachypodium distachyon
Bradi5g10980 5.0kb downstream 5.0kb downstream 5000 false Bd5: 14729058-14734057 Brachypodium distachyon
Bradi5g10980 10.0kb upstream 10.0kb upstream 14223 true Bd5: 14734058-14748280 Brachypodium distachyon
Bradi5g10980 10.0kb upstream 10.0kb upstream 10000 false Bd5: 14738281-14748280 Brachypodium distachyon
Bradi5g10980 10.0kb downstream 10.0kb downstream 14223 true Bd5: 14724058-14738280 Brachypodium distachyon
Bradi5g10980 10.0kb downstream 10.0kb downstream 10000 false Bd5: 14724058-14734057 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568610 5269 Grass View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.733        
cufflinks 5.988        
cufflinks 4.509        
cufflinks 4.94        
cufflinks 2.343        
cufflinks 5.552        
cufflinks 4.71        
cufflinks 4.346        
cufflinks 5.154        
cufflinks 2.871        
cufflinks 1.156       Low
cufflinks 4.624        
cufflinks 0.694       Low
cufflinks 0.899       Low
cufflinks 2.01        
cufflinks 5.373        
cufflinks 4.588        
cufflinks 12.659     High High
cufflinks 2.424        
cufflinks 0.608       Low
cufflinks 3.38        
cufflinks 4.127        
cufflinks 3.992        
cufflinks 3.963        
cufflinks 5.676        
cufflinks 3.359        
cufflinks 0.997       Low
cufflinks 2.455        
cufflinks 2.684        
cufflinks 5.132        

0 Strain