Gene : Bradi1g68880 B. distachyon v3.1
Defline:  (1 of 1) PF08513//PF10607 - LisH (LisH) // CTLH/CRA C-terminal to LisH motif domain (CLTH) Genomic Order:  8715
Name:  ? Bradi1g68880 Secondary Identifier:  ? PAC:32801772
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g68880 0.5kb upstream 0.5kb upstream 4237 true Bd1: 67557801-67562037 Brachypodium distachyon
Bradi1g68880 0.5kb upstream 0.5kb upstream 500 false Bd1: 67561538-67562037 Brachypodium distachyon
Bradi1g68880 0.5kb downstream 0.5kb downstream 4237 true Bd1: 67557301-67561537 Brachypodium distachyon
Bradi1g68880 0.5kb downstream 0.5kb downstream 500 false Bd1: 67557301-67557800 Brachypodium distachyon
Bradi1g68880 1.0kb upstream 1.0kb upstream 4737 true Bd1: 67557801-67562537 Brachypodium distachyon
Bradi1g68880 1.0kb upstream 1.0kb upstream 1000 false Bd1: 67561538-67562537 Brachypodium distachyon
Bradi1g68880 1.0kb downstream 1.0kb downstream 4737 true Bd1: 67556801-67561537 Brachypodium distachyon
Bradi1g68880 1.0kb downstream 1.0kb downstream 1000 false Bd1: 67556801-67557800 Brachypodium distachyon
Bradi1g68880 2.0kb upstream 2.0kb upstream 5737 true Bd1: 67557801-67563537 Brachypodium distachyon
Bradi1g68880 2.0kb upstream 2.0kb upstream 2000 false Bd1: 67561538-67563537 Brachypodium distachyon
Bradi1g68880 2.0kb downstream 2.0kb downstream 5737 true Bd1: 67555801-67561537 Brachypodium distachyon
Bradi1g68880 2.0kb downstream 2.0kb downstream 2000 false Bd1: 67555801-67557800 Brachypodium distachyon
Bradi1g68880 5.0kb upstream 5.0kb upstream 8737 true Bd1: 67557801-67566537 Brachypodium distachyon
Bradi1g68880 5.0kb upstream 5.0kb upstream 5000 false Bd1: 67561538-67566537 Brachypodium distachyon
Bradi1g68880 5.0kb downstream 5.0kb downstream 8737 true Bd1: 67552801-67561537 Brachypodium distachyon
Bradi1g68880 5.0kb downstream 5.0kb downstream 5000 false Bd1: 67552801-67557800 Brachypodium distachyon
Bradi1g68880 10.0kb upstream 10.0kb upstream 13737 true Bd1: 67557801-67571537 Brachypodium distachyon
Bradi1g68880 10.0kb upstream 10.0kb upstream 10000 false Bd1: 67561538-67571537 Brachypodium distachyon
Bradi1g68880 10.0kb downstream 10.0kb downstream 13737 true Bd1: 67547801-67561537 Brachypodium distachyon
Bradi1g68880 10.0kb downstream 10.0kb downstream 10000 false Bd1: 67547801-67557800 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576651 5269 Grass View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.718        
cufflinks 3.165        
cufflinks 2.979        
cufflinks 3.152        
cufflinks 2.288        
cufflinks 2.978        
cufflinks 2.97        
cufflinks 2.855        
cufflinks 2.784        
cufflinks 2.478        
cufflinks 2.185        
cufflinks 2.769        
cufflinks 1.979       Low
cufflinks 2.068       Low
cufflinks 2.318        
cufflinks 2.916        
cufflinks 2.963        
cufflinks 3.768       High
cufflinks 3.39        
cufflinks 1.097       Low
cufflinks 3.556       High
cufflinks 2.676        
cufflinks 2.631        
cufflinks 2.793        
cufflinks 2.891        
cufflinks 2.986        
cufflinks 2.154        
cufflinks 2.866        
cufflinks 2.428        
cufflinks 3.607       High

0 Strain