Gene : Bradi1g68910 B. distachyon v3.1
Defline:  (1 of 3) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  8718
Name:  ? Bradi1g68910 Secondary Identifier:  ? PAC:32793467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g68910 0.5kb upstream 0.5kb upstream 4904 true Bd1: 67573318-67578221 Brachypodium distachyon
Bradi1g68910 0.5kb upstream 0.5kb upstream 500 false Bd1: 67573318-67573817 Brachypodium distachyon
Bradi1g68910 0.5kb downstream 0.5kb downstream 4904 true Bd1: 67573818-67578721 Brachypodium distachyon
Bradi1g68910 0.5kb downstream 0.5kb downstream 500 false Bd1: 67578222-67578721 Brachypodium distachyon
Bradi1g68910 1.0kb upstream 1.0kb upstream 5404 true Bd1: 67572818-67578221 Brachypodium distachyon
Bradi1g68910 1.0kb upstream 1.0kb upstream 1000 false Bd1: 67572818-67573817 Brachypodium distachyon
Bradi1g68910 1.0kb downstream 1.0kb downstream 5404 true Bd1: 67573818-67579221 Brachypodium distachyon
Bradi1g68910 1.0kb downstream 1.0kb downstream 1000 false Bd1: 67578222-67579221 Brachypodium distachyon
Bradi1g68910 2.0kb upstream 2.0kb upstream 6404 true Bd1: 67571818-67578221 Brachypodium distachyon
Bradi1g68910 2.0kb upstream 2.0kb upstream 2000 false Bd1: 67571818-67573817 Brachypodium distachyon
Bradi1g68910 2.0kb downstream 2.0kb downstream 6404 true Bd1: 67573818-67580221 Brachypodium distachyon
Bradi1g68910 2.0kb downstream 2.0kb downstream 2000 false Bd1: 67578222-67580221 Brachypodium distachyon
Bradi1g68910 5.0kb upstream 5.0kb upstream 9404 true Bd1: 67568818-67578221 Brachypodium distachyon
Bradi1g68910 5.0kb upstream 5.0kb upstream 5000 false Bd1: 67568818-67573817 Brachypodium distachyon
Bradi1g68910 5.0kb downstream 5.0kb downstream 9404 true Bd1: 67573818-67583221 Brachypodium distachyon
Bradi1g68910 5.0kb downstream 5.0kb downstream 5000 false Bd1: 67578222-67583221 Brachypodium distachyon
Bradi1g68910 10.0kb upstream 10.0kb upstream 14404 true Bd1: 67563818-67578221 Brachypodium distachyon
Bradi1g68910 10.0kb upstream 10.0kb upstream 10000 false Bd1: 67563818-67573817 Brachypodium distachyon
Bradi1g68910 10.0kb downstream 10.0kb downstream 14404 true Bd1: 67573818-67588221 Brachypodium distachyon
Bradi1g68910 10.0kb downstream 10.0kb downstream 10000 false Bd1: 67578222-67588221 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586788 5269 Grass View MSA
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.881        
cufflinks 3.338        
cufflinks 2.695        
cufflinks 3.252        
cufflinks 1.766       Low
cufflinks 2.773        
cufflinks 3.493       High
cufflinks 2.365        
cufflinks 2.844        
cufflinks 2.448        
cufflinks 3.391        
cufflinks 1.742       Low
cufflinks 2.678        
cufflinks 2.566        
cufflinks 1.896        
cufflinks 2.693        
cufflinks 2.487        
cufflinks 2.386        
cufflinks 3.753       High
cufflinks 2.303        
cufflinks 4.149       High
cufflinks 2.285        
cufflinks 2.737        
cufflinks 3.197        
cufflinks 2.968        
cufflinks 2.161        
cufflinks 2.83        
cufflinks 2.483        
cufflinks 2.489        
cufflinks 2.767        

0 Strain