Gene : Bradi1g64597 B. distachyon v3.1
Defline:  (1 of 1) 4.3.2.1 - Argininosuccinate lyase / Omega-N-(L-arginino)succinate arginine-lyase Genomic Order:  8171
Name:  ? Bradi1g64597 Secondary Identifier:  ? PAC:32793218
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ARGSYNBSUB-PWY Brachypodium distachyon pathologic  
Bdistachyon ARGSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-4984 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g64597 0.5kb upstream 0.5kb upstream 6686 true Bd1: 63984817-63991502 Brachypodium distachyon
Bradi1g64597 0.5kb upstream 0.5kb upstream 500 false Bd1: 63991003-63991502 Brachypodium distachyon
Bradi1g64597 0.5kb downstream 0.5kb downstream 6686 true Bd1: 63984317-63991002 Brachypodium distachyon
Bradi1g64597 0.5kb downstream 0.5kb downstream 500 false Bd1: 63984317-63984816 Brachypodium distachyon
Bradi1g64597 1.0kb upstream 1.0kb upstream 7186 true Bd1: 63984817-63992002 Brachypodium distachyon
Bradi1g64597 1.0kb upstream 1.0kb upstream 1000 false Bd1: 63991003-63992002 Brachypodium distachyon
Bradi1g64597 1.0kb downstream 1.0kb downstream 7186 true Bd1: 63983817-63991002 Brachypodium distachyon
Bradi1g64597 1.0kb downstream 1.0kb downstream 1000 false Bd1: 63983817-63984816 Brachypodium distachyon
Bradi1g64597 2.0kb upstream 2.0kb upstream 8186 true Bd1: 63984817-63993002 Brachypodium distachyon
Bradi1g64597 2.0kb upstream 2.0kb upstream 2000 false Bd1: 63991003-63993002 Brachypodium distachyon
Bradi1g64597 2.0kb downstream 2.0kb downstream 8186 true Bd1: 63982817-63991002 Brachypodium distachyon
Bradi1g64597 2.0kb downstream 2.0kb downstream 2000 false Bd1: 63982817-63984816 Brachypodium distachyon
Bradi1g64597 5.0kb upstream 5.0kb upstream 11186 true Bd1: 63984817-63996002 Brachypodium distachyon
Bradi1g64597 5.0kb upstream 5.0kb upstream 5000 false Bd1: 63991003-63996002 Brachypodium distachyon
Bradi1g64597 5.0kb downstream 5.0kb downstream 11186 true Bd1: 63979817-63991002 Brachypodium distachyon
Bradi1g64597 5.0kb downstream 5.0kb downstream 5000 false Bd1: 63979817-63984816 Brachypodium distachyon
Bradi1g64597 10.0kb upstream 10.0kb upstream 16186 true Bd1: 63984817-64001002 Brachypodium distachyon
Bradi1g64597 10.0kb upstream 10.0kb upstream 10000 false Bd1: 63991003-64001002 Brachypodium distachyon
Bradi1g64597 10.0kb downstream 10.0kb downstream 16186 true Bd1: 63974817-63991002 Brachypodium distachyon
Bradi1g64597 10.0kb downstream 10.0kb downstream 10000 false Bd1: 63974817-63984816 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587066 5269 Grass View MSA
122042713 5273 Angiosperm View MSA
121348012 5274 Embryophyte View MSA
123425027 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.419     High  
cufflinks 16.001     High  
cufflinks 14.715     High  
cufflinks 15.423     High  
cufflinks 6.408        
cufflinks 11.95     High  
cufflinks 13.505     High  
cufflinks 10.262     High  
cufflinks 11.602     High  
cufflinks 10.098        
cufflinks 4.432       Low
cufflinks 10.988     High  
cufflinks 3.618       Low
cufflinks 3.736       Low
cufflinks 5.226       Low
cufflinks 12.612     High  
cufflinks 12.024     High  
cufflinks 18.0     High High
cufflinks 14.392     High  
cufflinks 2.778       Low
cufflinks 13.684     High  
cufflinks 11.671     High  
cufflinks 9.766     High  
cufflinks 10.337     High  
cufflinks 13.133     High  
cufflinks 13.881     High  
cufflinks 2.74       Low
cufflinks 11.812     High  
cufflinks 11.811     High  
cufflinks 15.494     High  

0 Strain