Gene : Bradi1g64630 B. distachyon v3.1
Defline:  (1 of 2) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  8175
Name:  ? Bradi1g64630 Secondary Identifier:  ? PAC:32803901
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-1121 Brachypodium distachyon pathologic  
Bdistachyon PWY-321 Brachypodium distachyon pathologic  
Bdistachyon PWY-5136 Brachypodium distachyon pathologic  
Bdistachyon PWY-5143 Brachypodium distachyon pathologic  
Bdistachyon PWY-5147 Brachypodium distachyon pathologic  
Bdistachyon PWY-5156 Brachypodium distachyon pathologic  
Bdistachyon PWY-561 Brachypodium distachyon pathologic  
Bdistachyon PWY-5885 Brachypodium distachyon pathologic  
Bdistachyon PWY-5971 Brachypodium distachyon pathologic  
Bdistachyon PWY-5989 Brachypodium distachyon pathologic  
Bdistachyon PWY66-21 Brachypodium distachyon pathologic  
Bdistachyon PWY-6733 Brachypodium distachyon pathologic  
Bdistachyon PWY-6803 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g64630 0.5kb upstream 0.5kb upstream 5697 true Bd1: 64002683-64008379 Brachypodium distachyon
Bradi1g64630 0.5kb upstream 0.5kb upstream 500 false Bd1: 64002683-64003182 Brachypodium distachyon
Bradi1g64630 0.5kb downstream 0.5kb downstream 5697 true Bd1: 64003183-64008879 Brachypodium distachyon
Bradi1g64630 0.5kb downstream 0.5kb downstream 500 false Bd1: 64008380-64008879 Brachypodium distachyon
Bradi1g64630 1.0kb upstream 1.0kb upstream 6197 true Bd1: 64002183-64008379 Brachypodium distachyon
Bradi1g64630 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64002183-64003182 Brachypodium distachyon
Bradi1g64630 1.0kb downstream 1.0kb downstream 6197 true Bd1: 64003183-64009379 Brachypodium distachyon
Bradi1g64630 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64008380-64009379 Brachypodium distachyon
Bradi1g64630 2.0kb upstream 2.0kb upstream 7197 true Bd1: 64001183-64008379 Brachypodium distachyon
Bradi1g64630 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64001183-64003182 Brachypodium distachyon
Bradi1g64630 2.0kb downstream 2.0kb downstream 7197 true Bd1: 64003183-64010379 Brachypodium distachyon
Bradi1g64630 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64008380-64010379 Brachypodium distachyon
Bradi1g64630 5.0kb upstream 5.0kb upstream 10197 true Bd1: 63998183-64008379 Brachypodium distachyon
Bradi1g64630 5.0kb upstream 5.0kb upstream 5000 false Bd1: 63998183-64003182 Brachypodium distachyon
Bradi1g64630 5.0kb downstream 5.0kb downstream 10197 true Bd1: 64003183-64013379 Brachypodium distachyon
Bradi1g64630 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64008380-64013379 Brachypodium distachyon
Bradi1g64630 10.0kb upstream 10.0kb upstream 15197 true Bd1: 63993183-64008379 Brachypodium distachyon
Bradi1g64630 10.0kb upstream 10.0kb upstream 10000 false Bd1: 63993183-64003182 Brachypodium distachyon
Bradi1g64630 10.0kb downstream 10.0kb downstream 15197 true Bd1: 64003183-64018379 Brachypodium distachyon
Bradi1g64630 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64008380-64018379 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577556 5269 Grass View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.579        
cufflinks 1.045        
cufflinks 1.178        
cufflinks 0.883        
cufflinks 6.521       High
cufflinks 0.753        
cufflinks 0.959        
cufflinks 0.702        
cufflinks 0.737        
cufflinks 0.787        
cufflinks 0.692        
cufflinks 0.892        
cufflinks 0.399       Low
cufflinks 0.366       Low
cufflinks 0.605        
cufflinks 0.799        
cufflinks 0.746        
cufflinks 1.745        
cufflinks 4.834       High
cufflinks 14.765     High High
cufflinks 1.567        
cufflinks 0.895        
cufflinks 0.824        
cufflinks 0.679        
cufflinks 0.698        
cufflinks 1.025        
cufflinks 0.407       Low
cufflinks 1.086        
cufflinks 0.93        
cufflinks 1.849        

0 Strain