Gene : Bradi1g64530 B. distachyon v3.1
Defline:  (1 of 1) PTHR20858:SF18 - PROTEIN PET18 Genomic Order:  8163
Name:  ? Bradi1g64530 Secondary Identifier:  ? PAC:32803858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g64530 0.5kb upstream 0.5kb upstream 3574 true Bd1: 63934336-63937909 Brachypodium distachyon
Bradi1g64530 0.5kb upstream 0.5kb upstream 500 false Bd1: 63934336-63934835 Brachypodium distachyon
Bradi1g64530 0.5kb downstream 0.5kb downstream 3574 true Bd1: 63934836-63938409 Brachypodium distachyon
Bradi1g64530 0.5kb downstream 0.5kb downstream 500 false Bd1: 63937910-63938409 Brachypodium distachyon
Bradi1g64530 1.0kb upstream 1.0kb upstream 4074 true Bd1: 63933836-63937909 Brachypodium distachyon
Bradi1g64530 1.0kb upstream 1.0kb upstream 1000 false Bd1: 63933836-63934835 Brachypodium distachyon
Bradi1g64530 1.0kb downstream 1.0kb downstream 4074 true Bd1: 63934836-63938909 Brachypodium distachyon
Bradi1g64530 1.0kb downstream 1.0kb downstream 1000 false Bd1: 63937910-63938909 Brachypodium distachyon
Bradi1g64530 2.0kb upstream 2.0kb upstream 5074 true Bd1: 63932836-63937909 Brachypodium distachyon
Bradi1g64530 2.0kb upstream 2.0kb upstream 2000 false Bd1: 63932836-63934835 Brachypodium distachyon
Bradi1g64530 2.0kb downstream 2.0kb downstream 5074 true Bd1: 63934836-63939909 Brachypodium distachyon
Bradi1g64530 2.0kb downstream 2.0kb downstream 2000 false Bd1: 63937910-63939909 Brachypodium distachyon
Bradi1g64530 5.0kb upstream 5.0kb upstream 8074 true Bd1: 63929836-63937909 Brachypodium distachyon
Bradi1g64530 5.0kb upstream 5.0kb upstream 5000 false Bd1: 63929836-63934835 Brachypodium distachyon
Bradi1g64530 5.0kb downstream 5.0kb downstream 8074 true Bd1: 63934836-63942909 Brachypodium distachyon
Bradi1g64530 5.0kb downstream 5.0kb downstream 5000 false Bd1: 63937910-63942909 Brachypodium distachyon
Bradi1g64530 10.0kb upstream 10.0kb upstream 13074 true Bd1: 63924836-63937909 Brachypodium distachyon
Bradi1g64530 10.0kb upstream 10.0kb upstream 10000 false Bd1: 63924836-63934835 Brachypodium distachyon
Bradi1g64530 10.0kb downstream 10.0kb downstream 13074 true Bd1: 63934836-63947909 Brachypodium distachyon
Bradi1g64530 10.0kb downstream 10.0kb downstream 10000 false Bd1: 63937910-63947909 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577897 5269 Grass View MSA
122042801 5273 Angiosperm View MSA
121348004 5274 Embryophyte View MSA
123425587 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05       Low
cufflinks 1.431        
cufflinks 1.952        
cufflinks 2.398        
cufflinks 1.972        
cufflinks 1.59        
cufflinks 1.611        
cufflinks 1.426        
cufflinks 1.46        
cufflinks 3.092        
cufflinks 1.479        
cufflinks 1.409        
cufflinks 1.26       Low
cufflinks 1.177       Low
cufflinks 1.399        
cufflinks 1.075       Low
cufflinks 1.494        
cufflinks 5.252       High
cufflinks 2.249        
cufflinks 1.523        
cufflinks 4.42       High
cufflinks 1.874        
cufflinks 1.618        
cufflinks 1.531        
cufflinks 1.736        
cufflinks 2.916        
cufflinks 1.812        
cufflinks 3.546       High
cufflinks 3.055        
cufflinks 2.881        

0 Strain