Gene : Bradi5g12100 B. distachyon v3.1
Defline:  (1 of 1) PTHR10949:SF0 - LIPOYL SYNTHASE, MITOCHONDRIAL Genomic Order:  1301
Name:  ? Bradi5g12100 Secondary Identifier:  ? PAC:32807692
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY0-501 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g12100 0.5kb upstream 0.5kb upstream 4764 true Bd5: 15736331-15741094 Brachypodium distachyon
Bradi5g12100 0.5kb upstream 0.5kb upstream 500 false Bd5: 15740595-15741094 Brachypodium distachyon
Bradi5g12100 0.5kb downstream 0.5kb downstream 4764 true Bd5: 15735831-15740594 Brachypodium distachyon
Bradi5g12100 0.5kb downstream 0.5kb downstream 500 false Bd5: 15735831-15736330 Brachypodium distachyon
Bradi5g12100 1.0kb upstream 1.0kb upstream 5264 true Bd5: 15736331-15741594 Brachypodium distachyon
Bradi5g12100 1.0kb upstream 1.0kb upstream 1000 false Bd5: 15740595-15741594 Brachypodium distachyon
Bradi5g12100 1.0kb downstream 1.0kb downstream 5264 true Bd5: 15735331-15740594 Brachypodium distachyon
Bradi5g12100 1.0kb downstream 1.0kb downstream 1000 false Bd5: 15735331-15736330 Brachypodium distachyon
Bradi5g12100 2.0kb upstream 2.0kb upstream 6264 true Bd5: 15736331-15742594 Brachypodium distachyon
Bradi5g12100 2.0kb upstream 2.0kb upstream 2000 false Bd5: 15740595-15742594 Brachypodium distachyon
Bradi5g12100 2.0kb downstream 2.0kb downstream 6264 true Bd5: 15734331-15740594 Brachypodium distachyon
Bradi5g12100 2.0kb downstream 2.0kb downstream 2000 false Bd5: 15734331-15736330 Brachypodium distachyon
Bradi5g12100 5.0kb upstream 5.0kb upstream 9264 true Bd5: 15736331-15745594 Brachypodium distachyon
Bradi5g12100 5.0kb upstream 5.0kb upstream 5000 false Bd5: 15740595-15745594 Brachypodium distachyon
Bradi5g12100 5.0kb downstream 5.0kb downstream 9264 true Bd5: 15731331-15740594 Brachypodium distachyon
Bradi5g12100 5.0kb downstream 5.0kb downstream 5000 false Bd5: 15731331-15736330 Brachypodium distachyon
Bradi5g12100 10.0kb upstream 10.0kb upstream 14264 true Bd5: 15736331-15750594 Brachypodium distachyon
Bradi5g12100 10.0kb upstream 10.0kb upstream 10000 false Bd5: 15740595-15750594 Brachypodium distachyon
Bradi5g12100 10.0kb downstream 10.0kb downstream 14264 true Bd5: 15726331-15740594 Brachypodium distachyon
Bradi5g12100 10.0kb downstream 10.0kb downstream 10000 false Bd5: 15726331-15736330 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572628 5269 Grass View MSA
122045804 5273 Angiosperm View MSA
121345971 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.794     High  
cufflinks 25.839     High  
cufflinks 29.49     High High
cufflinks 30.697     High High
cufflinks 20.284     High  
cufflinks 17.503     High  
cufflinks 21.182     High  
cufflinks 20.787     High  
cufflinks 16.996     High  
cufflinks 23.772     High  
cufflinks 16.884     High  
cufflinks 19.311     High  
cufflinks 18.463     High  
cufflinks 17.137     High  
cufflinks 22.317     High  
cufflinks 20.116     High  
cufflinks 20.915     High  
cufflinks 14.216     High Low
cufflinks 19.107     High  
cufflinks 17.07     High  
cufflinks 20.976     High  
cufflinks 24.534     High  
cufflinks 20.795     High  
cufflinks 17.973     High  
cufflinks 18.323     High  
cufflinks 33.241     High High
cufflinks 13.455     High Low
cufflinks 29.444     High High
cufflinks 26.328     High  
cufflinks 20.52     High  

0 Strain