Gene : Bradi1g65180 B. distachyon v3.1
Defline:  (1 of 1) PTHR15071 - CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR Genomic Order:  8236
Name:  ? Bradi1g65180 Secondary Identifier:  ? PAC:32796807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g65180 0.5kb upstream 0.5kb upstream 6768 true Bd1: 64465292-64472059 Brachypodium distachyon
Bradi1g65180 0.5kb upstream 0.5kb upstream 500 false Bd1: 64471560-64472059 Brachypodium distachyon
Bradi1g65180 0.5kb downstream 0.5kb downstream 6768 true Bd1: 64464792-64471559 Brachypodium distachyon
Bradi1g65180 0.5kb downstream 0.5kb downstream 500 false Bd1: 64464792-64465291 Brachypodium distachyon
Bradi1g65180 1.0kb upstream 1.0kb upstream 7268 true Bd1: 64465292-64472559 Brachypodium distachyon
Bradi1g65180 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64471560-64472559 Brachypodium distachyon
Bradi1g65180 1.0kb downstream 1.0kb downstream 7268 true Bd1: 64464292-64471559 Brachypodium distachyon
Bradi1g65180 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64464292-64465291 Brachypodium distachyon
Bradi1g65180 2.0kb upstream 2.0kb upstream 8268 true Bd1: 64465292-64473559 Brachypodium distachyon
Bradi1g65180 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64471560-64473559 Brachypodium distachyon
Bradi1g65180 2.0kb downstream 2.0kb downstream 8268 true Bd1: 64463292-64471559 Brachypodium distachyon
Bradi1g65180 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64463292-64465291 Brachypodium distachyon
Bradi1g65180 5.0kb upstream 5.0kb upstream 11268 true Bd1: 64465292-64476559 Brachypodium distachyon
Bradi1g65180 5.0kb upstream 5.0kb upstream 5000 false Bd1: 64471560-64476559 Brachypodium distachyon
Bradi1g65180 5.0kb downstream 5.0kb downstream 11268 true Bd1: 64460292-64471559 Brachypodium distachyon
Bradi1g65180 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64460292-64465291 Brachypodium distachyon
Bradi1g65180 10.0kb upstream 10.0kb upstream 16268 true Bd1: 64465292-64481559 Brachypodium distachyon
Bradi1g65180 10.0kb upstream 10.0kb upstream 10000 false Bd1: 64471560-64481559 Brachypodium distachyon
Bradi1g65180 10.0kb downstream 10.0kb downstream 16268 true Bd1: 64455292-64471559 Brachypodium distachyon
Bradi1g65180 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64455292-64465291 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573950 5269 Grass View MSA
122046293 5273 Angiosperm View MSA
121344129 5274 Embryophyte View MSA
123379979 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.247        
cufflinks 0.415        
cufflinks 0.422        
cufflinks 0.47        
cufflinks 0.156        
cufflinks 0.353        
cufflinks 0.434        
cufflinks 0.312        
cufflinks 0.333        
cufflinks 0.276        
cufflinks 0.005     Low Low
cufflinks 0.227        
cufflinks 0.008     Low Low
cufflinks 0.004     Low Low
cufflinks 0.071     Low  
cufflinks 0.362        
cufflinks 0.394        
cufflinks 0.794        
cufflinks 0.33        
cufflinks 0.199        
cufflinks 0.949       High
cufflinks 0.317        
cufflinks 0.32        
cufflinks 0.28        
cufflinks 0.476        
cufflinks 0.477        
cufflinks 0.004     Low Low
cufflinks 0.396        
cufflinks 0.482        
cufflinks 0.465        

0 Strain