Gene : Bradi1g65420 B. distachyon v3.1
Defline:  (1 of 1) PTHR10606//PTHR10606:SF43 - 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE // SUBFAMILY NOT NAMED Genomic Order:  8263
Name:  ? Bradi1g65420 Secondary Identifier:  ? PAC:32795224
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY66-423 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g65420 0.5kb upstream 0.5kb upstream 12442 true Bd1: 64633799-64646240 Brachypodium distachyon
Bradi1g65420 0.5kb upstream 0.5kb upstream 500 false Bd1: 64645741-64646240 Brachypodium distachyon
Bradi1g65420 0.5kb downstream 0.5kb downstream 12442 true Bd1: 64633299-64645740 Brachypodium distachyon
Bradi1g65420 0.5kb downstream 0.5kb downstream 500 false Bd1: 64633299-64633798 Brachypodium distachyon
Bradi1g65420 1.0kb upstream 1.0kb upstream 12942 true Bd1: 64633799-64646740 Brachypodium distachyon
Bradi1g65420 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64645741-64646740 Brachypodium distachyon
Bradi1g65420 1.0kb downstream 1.0kb downstream 12942 true Bd1: 64632799-64645740 Brachypodium distachyon
Bradi1g65420 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64632799-64633798 Brachypodium distachyon
Bradi1g65420 2.0kb upstream 2.0kb upstream 13942 true Bd1: 64633799-64647740 Brachypodium distachyon
Bradi1g65420 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64645741-64647740 Brachypodium distachyon
Bradi1g65420 2.0kb downstream 2.0kb downstream 13942 true Bd1: 64631799-64645740 Brachypodium distachyon
Bradi1g65420 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64631799-64633798 Brachypodium distachyon
Bradi1g65420 5.0kb upstream 5.0kb upstream 16942 true Bd1: 64633799-64650740 Brachypodium distachyon
Bradi1g65420 5.0kb upstream 5.0kb upstream 5000 false Bd1: 64645741-64650740 Brachypodium distachyon
Bradi1g65420 5.0kb downstream 5.0kb downstream 16942 true Bd1: 64628799-64645740 Brachypodium distachyon
Bradi1g65420 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64628799-64633798 Brachypodium distachyon
Bradi1g65420 10.0kb upstream 10.0kb upstream 21942 true Bd1: 64633799-64655740 Brachypodium distachyon
Bradi1g65420 10.0kb upstream 10.0kb upstream 10000 false Bd1: 64645741-64655740 Brachypodium distachyon
Bradi1g65420 10.0kb downstream 10.0kb downstream 21942 true Bd1: 64623799-64645740 Brachypodium distachyon
Bradi1g65420 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64623799-64633798 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040879 5273 Angiosperm View MSA
124588661 5269 Grass View MSA
121347191 5274 Embryophyte View MSA
123428549 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.228        
cufflinks 3.28        
cufflinks 3.639        
cufflinks 2.849        
cufflinks 2.05       Low
cufflinks 3.298        
cufflinks 2.744        
cufflinks 3.181        
cufflinks 3.396        
cufflinks 3.914        
cufflinks 3.01        
cufflinks 3.938        
cufflinks 3.022        
cufflinks 2.447        
cufflinks 2.666        
cufflinks 3.81        
cufflinks 2.541        
cufflinks 3.456        
cufflinks 1.914       Low
cufflinks 2.275        
cufflinks 2.138       Low
cufflinks 4.861       High
cufflinks 3.017        
cufflinks 3.004        
cufflinks 2.762        
cufflinks 4.331       High
cufflinks 3.044        
cufflinks 4.007        
cufflinks 4.292       High
cufflinks 3.143        

0 Strain