Gene : Bradi1g65571 B. distachyon v3.1
Defline:  (1 of 1) PTHR11200:SF120 - PHOSPHOINOSITIDE PHOSPHATASE SAC6-RELATED Genomic Order:  8283
Name:  ? Bradi1g65571 Secondary Identifier:  ? PAC:32799372
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6368 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g65571 0.5kb upstream 0.5kb upstream 8025 true Bd1: 64775099-64783123 Brachypodium distachyon
Bradi1g65571 0.5kb upstream 0.5kb upstream 500 false Bd1: 64775099-64775598 Brachypodium distachyon
Bradi1g65571 0.5kb downstream 0.5kb downstream 8025 true Bd1: 64775599-64783623 Brachypodium distachyon
Bradi1g65571 0.5kb downstream 0.5kb downstream 500 false Bd1: 64783124-64783623 Brachypodium distachyon
Bradi1g65571 1.0kb upstream 1.0kb upstream 8525 true Bd1: 64774599-64783123 Brachypodium distachyon
Bradi1g65571 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64774599-64775598 Brachypodium distachyon
Bradi1g65571 1.0kb downstream 1.0kb downstream 8525 true Bd1: 64775599-64784123 Brachypodium distachyon
Bradi1g65571 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64783124-64784123 Brachypodium distachyon
Bradi1g65571 2.0kb upstream 2.0kb upstream 9525 true Bd1: 64773599-64783123 Brachypodium distachyon
Bradi1g65571 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64773599-64775598 Brachypodium distachyon
Bradi1g65571 2.0kb downstream 2.0kb downstream 9525 true Bd1: 64775599-64785123 Brachypodium distachyon
Bradi1g65571 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64783124-64785123 Brachypodium distachyon
Bradi1g65571 5.0kb upstream 5.0kb upstream 12525 true Bd1: 64770599-64783123 Brachypodium distachyon
Bradi1g65571 5.0kb upstream 5.0kb upstream 5000 false Bd1: 64770599-64775598 Brachypodium distachyon
Bradi1g65571 5.0kb downstream 5.0kb downstream 12525 true Bd1: 64775599-64788123 Brachypodium distachyon
Bradi1g65571 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64783124-64788123 Brachypodium distachyon
Bradi1g65571 10.0kb upstream 10.0kb upstream 17525 true Bd1: 64765599-64783123 Brachypodium distachyon
Bradi1g65571 10.0kb upstream 10.0kb upstream 10000 false Bd1: 64765599-64775598 Brachypodium distachyon
Bradi1g65571 10.0kb downstream 10.0kb downstream 17525 true Bd1: 64775599-64793123 Brachypodium distachyon
Bradi1g65571 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64783124-64793123 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573460 5269 Grass View MSA
122049709 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.454        
cufflinks 2.838        
cufflinks 2.905        
cufflinks 2.128        
cufflinks 2.659        
cufflinks 2.846        
cufflinks 2.622        
cufflinks 3.407        
cufflinks 3.182        
cufflinks 2.505        
cufflinks 4.765       High
cufflinks 3.041        
cufflinks 3.791        
cufflinks 3.193        
cufflinks 3.251        
cufflinks 2.852        
cufflinks 2.503        
cufflinks 4.762       High
cufflinks 3.521        
cufflinks 1.841       Low
cufflinks 2.815        
cufflinks 3.999        
cufflinks 3.474        
cufflinks 3.051        
cufflinks 2.421        
cufflinks 3.709        
cufflinks 5.67       High
cufflinks 3.571        
cufflinks 3.209        
cufflinks 2.745        

0 Strain