Gene : Bradi1g65620 B. distachyon v3.1
Defline:  (1 of 1) PTHR21236:SF8 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  8290
Name:  ? Bradi1g65620 Secondary Identifier:  ? PAC:32791802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g65620 0.5kb upstream 0.5kb upstream 3699 true Bd1: 64815347-64819045 Brachypodium distachyon
Bradi1g65620 0.5kb upstream 0.5kb upstream 500 false Bd1: 64818546-64819045 Brachypodium distachyon
Bradi1g65620 0.5kb downstream 0.5kb downstream 3699 true Bd1: 64814847-64818545 Brachypodium distachyon
Bradi1g65620 0.5kb downstream 0.5kb downstream 500 false Bd1: 64814847-64815346 Brachypodium distachyon
Bradi1g65620 1.0kb upstream 1.0kb upstream 4199 true Bd1: 64815347-64819545 Brachypodium distachyon
Bradi1g65620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64818546-64819545 Brachypodium distachyon
Bradi1g65620 1.0kb downstream 1.0kb downstream 4199 true Bd1: 64814347-64818545 Brachypodium distachyon
Bradi1g65620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64814347-64815346 Brachypodium distachyon
Bradi1g65620 2.0kb upstream 2.0kb upstream 5199 true Bd1: 64815347-64820545 Brachypodium distachyon
Bradi1g65620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64818546-64820545 Brachypodium distachyon
Bradi1g65620 2.0kb downstream 2.0kb downstream 5199 true Bd1: 64813347-64818545 Brachypodium distachyon
Bradi1g65620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64813347-64815346 Brachypodium distachyon
Bradi1g65620 5.0kb upstream 5.0kb upstream 8199 true Bd1: 64815347-64823545 Brachypodium distachyon
Bradi1g65620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 64818546-64823545 Brachypodium distachyon
Bradi1g65620 5.0kb downstream 5.0kb downstream 8199 true Bd1: 64810347-64818545 Brachypodium distachyon
Bradi1g65620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64810347-64815346 Brachypodium distachyon
Bradi1g65620 10.0kb upstream 10.0kb upstream 13199 true Bd1: 64815347-64828545 Brachypodium distachyon
Bradi1g65620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 64818546-64828545 Brachypodium distachyon
Bradi1g65620 10.0kb downstream 10.0kb downstream 13199 true Bd1: 64805347-64818545 Brachypodium distachyon
Bradi1g65620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64805347-64815346 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587051 5269 Grass View MSA
122046635 5273 Angiosperm View MSA
121346620 5274 Embryophyte View MSA
123427417 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.16        
cufflinks 5.86        
cufflinks 4.725        
cufflinks 5.245        
cufflinks 9.914     High High
cufflinks 5.32        
cufflinks 6.307        
cufflinks 6.379        
cufflinks 5.437        
cufflinks 4.551        
cufflinks 4.02        
cufflinks 4.799        
cufflinks 3.185       Low
cufflinks 3.427       Low
cufflinks 3.913        
cufflinks 5.157        
cufflinks 6.164        
cufflinks 10.068       High
cufflinks 16.196     High High
cufflinks 17.545     High High
cufflinks 10.006       High
cufflinks 4.114        
cufflinks 5.498        
cufflinks 4.817        
cufflinks 4.818        
cufflinks 4.671        
cufflinks 4.097        
cufflinks 4.56        
cufflinks 4.509        
cufflinks 7.942        

0 Strain