Gene : Bradi1g65440 B. distachyon v3.1
Defline:  (1 of 1) PTHR18968:SF137 - PYRUVATE DECARBOXYLASE 2 Genomic Order:  8268
Name:  ? Bradi1g65440 Secondary Identifier:  ? PAC:32804281
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5486 Brachypodium distachyon pathologic  
Bdistachyon PWY-6330 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g65440 0.5kb upstream 0.5kb upstream 3735 true Bd1: 64663257-64666991 Brachypodium distachyon
Bradi1g65440 0.5kb upstream 0.5kb upstream 500 false Bd1: 64663257-64663756 Brachypodium distachyon
Bradi1g65440 0.5kb downstream 0.5kb downstream 3735 true Bd1: 64663757-64667491 Brachypodium distachyon
Bradi1g65440 0.5kb downstream 0.5kb downstream 500 false Bd1: 64666992-64667491 Brachypodium distachyon
Bradi1g65440 1.0kb upstream 1.0kb upstream 4235 true Bd1: 64662757-64666991 Brachypodium distachyon
Bradi1g65440 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64662757-64663756 Brachypodium distachyon
Bradi1g65440 1.0kb downstream 1.0kb downstream 4235 true Bd1: 64663757-64667991 Brachypodium distachyon
Bradi1g65440 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64666992-64667991 Brachypodium distachyon
Bradi1g65440 2.0kb upstream 2.0kb upstream 5235 true Bd1: 64661757-64666991 Brachypodium distachyon
Bradi1g65440 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64661757-64663756 Brachypodium distachyon
Bradi1g65440 2.0kb downstream 2.0kb downstream 5235 true Bd1: 64663757-64668991 Brachypodium distachyon
Bradi1g65440 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64666992-64668991 Brachypodium distachyon
Bradi1g65440 5.0kb upstream 5.0kb upstream 8235 true Bd1: 64658757-64666991 Brachypodium distachyon
Bradi1g65440 5.0kb upstream 5.0kb upstream 5000 false Bd1: 64658757-64663756 Brachypodium distachyon
Bradi1g65440 5.0kb downstream 5.0kb downstream 8235 true Bd1: 64663757-64671991 Brachypodium distachyon
Bradi1g65440 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64666992-64671991 Brachypodium distachyon
Bradi1g65440 10.0kb upstream 10.0kb upstream 13235 true Bd1: 64653757-64666991 Brachypodium distachyon
Bradi1g65440 10.0kb upstream 10.0kb upstream 10000 false Bd1: 64653757-64663756 Brachypodium distachyon
Bradi1g65440 10.0kb downstream 10.0kb downstream 13235 true Bd1: 64663757-64676991 Brachypodium distachyon
Bradi1g65440 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64666992-64676991 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587112 5269 Grass View MSA
122042059 5273 Angiosperm View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.93       High
cufflinks 5.104        
cufflinks 4.34        
cufflinks 4.455        
cufflinks 7.811        
cufflinks 2.694        
cufflinks 4.008        
cufflinks 2.979        
cufflinks 2.897        
cufflinks 2.758        
cufflinks 2.261       Low
cufflinks 3.163        
cufflinks 3.457        
cufflinks 1.969       Low
cufflinks 5.503        
cufflinks 3.696        
cufflinks 4.232        
cufflinks 31.902     High High
cufflinks 9.001       High
cufflinks 6.578        
cufflinks 4.553        
cufflinks 3.151        
cufflinks 2.98        
cufflinks 2.918        
cufflinks 2.794        
cufflinks 3.649        
cufflinks 4.03        
cufflinks 4.81        
cufflinks 4.388        
cufflinks 4.83        

0 Strain