Gene : Bradi5g11370 B. distachyon v3.1
Defline:  (1 of 2) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) Genomic Order:  1235
Name:  ? Bradi5g11370 Secondary Identifier:  ? PAC:32811361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g11370 0.5kb upstream 0.5kb upstream 4047 true Bd5: 15081588-15085634 Brachypodium distachyon
Bradi5g11370 0.5kb upstream 0.5kb upstream 500 false Bd5: 15085135-15085634 Brachypodium distachyon
Bradi5g11370 0.5kb downstream 0.5kb downstream 4047 true Bd5: 15081088-15085134 Brachypodium distachyon
Bradi5g11370 0.5kb downstream 0.5kb downstream 500 false Bd5: 15081088-15081587 Brachypodium distachyon
Bradi5g11370 1.0kb upstream 1.0kb upstream 4547 true Bd5: 15081588-15086134 Brachypodium distachyon
Bradi5g11370 1.0kb upstream 1.0kb upstream 1000 false Bd5: 15085135-15086134 Brachypodium distachyon
Bradi5g11370 1.0kb downstream 1.0kb downstream 4547 true Bd5: 15080588-15085134 Brachypodium distachyon
Bradi5g11370 1.0kb downstream 1.0kb downstream 1000 false Bd5: 15080588-15081587 Brachypodium distachyon
Bradi5g11370 2.0kb upstream 2.0kb upstream 5547 true Bd5: 15081588-15087134 Brachypodium distachyon
Bradi5g11370 2.0kb upstream 2.0kb upstream 2000 false Bd5: 15085135-15087134 Brachypodium distachyon
Bradi5g11370 2.0kb downstream 2.0kb downstream 5547 true Bd5: 15079588-15085134 Brachypodium distachyon
Bradi5g11370 2.0kb downstream 2.0kb downstream 2000 false Bd5: 15079588-15081587 Brachypodium distachyon
Bradi5g11370 5.0kb upstream 5.0kb upstream 8547 true Bd5: 15081588-15090134 Brachypodium distachyon
Bradi5g11370 5.0kb upstream 5.0kb upstream 5000 false Bd5: 15085135-15090134 Brachypodium distachyon
Bradi5g11370 5.0kb downstream 5.0kb downstream 8547 true Bd5: 15076588-15085134 Brachypodium distachyon
Bradi5g11370 5.0kb downstream 5.0kb downstream 5000 false Bd5: 15076588-15081587 Brachypodium distachyon
Bradi5g11370 10.0kb upstream 10.0kb upstream 13547 true Bd5: 15081588-15095134 Brachypodium distachyon
Bradi5g11370 10.0kb upstream 10.0kb upstream 10000 false Bd5: 15085135-15095134 Brachypodium distachyon
Bradi5g11370 10.0kb downstream 10.0kb downstream 13547 true Bd5: 15071588-15085134 Brachypodium distachyon
Bradi5g11370 10.0kb downstream 10.0kb downstream 10000 false Bd5: 15071588-15081587 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
124568986 5269 Grass View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.288        
cufflinks 5.239        
cufflinks 3.993        
cufflinks 5.066        
cufflinks 11.938     High High
cufflinks 3.917        
cufflinks 3.667        
cufflinks 7.733        
cufflinks 3.642        
cufflinks 3.231       Low
cufflinks 10.779     High High
cufflinks 14.481     High High
cufflinks 4.909        
cufflinks 5.006        
cufflinks 25.532     High High
cufflinks 5.628        
cufflinks 4.127        
cufflinks 9.059        
cufflinks 10.435       High
cufflinks 8.51        
cufflinks 3.784        
cufflinks 3.874        
cufflinks 4.259        
cufflinks 4.445        
cufflinks 3.538        
cufflinks 3.769        
cufflinks 3.767        
cufflinks 3.449        
cufflinks 3.791        
cufflinks 8.181        

0 Strain