Gene : Bradi1g66090 B. distachyon v3.1
Defline:  (1 of 1) PTHR14154:SF15 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE, PUTATIVE-RELATED Genomic Order:  8349
Name:  ? Bradi1g66090 Secondary Identifier:  ? PAC:32796224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g66090 0.5kb upstream 0.5kb upstream 1091 true Bd1: 65155704-65156794 Brachypodium distachyon
Bradi1g66090 0.5kb upstream 0.5kb upstream 500 false Bd1: 65156295-65156794 Brachypodium distachyon
Bradi1g66090 0.5kb downstream 0.5kb downstream 1091 true Bd1: 65155204-65156294 Brachypodium distachyon
Bradi1g66090 0.5kb downstream 0.5kb downstream 500 false Bd1: 65155204-65155703 Brachypodium distachyon
Bradi1g66090 1.0kb upstream 1.0kb upstream 1591 true Bd1: 65155704-65157294 Brachypodium distachyon
Bradi1g66090 1.0kb upstream 1.0kb upstream 1000 false Bd1: 65156295-65157294 Brachypodium distachyon
Bradi1g66090 1.0kb downstream 1.0kb downstream 1591 true Bd1: 65154704-65156294 Brachypodium distachyon
Bradi1g66090 1.0kb downstream 1.0kb downstream 1000 false Bd1: 65154704-65155703 Brachypodium distachyon
Bradi1g66090 2.0kb upstream 2.0kb upstream 2591 true Bd1: 65155704-65158294 Brachypodium distachyon
Bradi1g66090 2.0kb upstream 2.0kb upstream 2000 false Bd1: 65156295-65158294 Brachypodium distachyon
Bradi1g66090 2.0kb downstream 2.0kb downstream 2591 true Bd1: 65153704-65156294 Brachypodium distachyon
Bradi1g66090 2.0kb downstream 2.0kb downstream 2000 false Bd1: 65153704-65155703 Brachypodium distachyon
Bradi1g66090 5.0kb upstream 5.0kb upstream 5591 true Bd1: 65155704-65161294 Brachypodium distachyon
Bradi1g66090 5.0kb upstream 5.0kb upstream 5000 false Bd1: 65156295-65161294 Brachypodium distachyon
Bradi1g66090 5.0kb downstream 5.0kb downstream 5591 true Bd1: 65150704-65156294 Brachypodium distachyon
Bradi1g66090 5.0kb downstream 5.0kb downstream 5000 false Bd1: 65150704-65155703 Brachypodium distachyon
Bradi1g66090 10.0kb upstream 10.0kb upstream 10591 true Bd1: 65155704-65166294 Brachypodium distachyon
Bradi1g66090 10.0kb upstream 10.0kb upstream 10000 false Bd1: 65156295-65166294 Brachypodium distachyon
Bradi1g66090 10.0kb downstream 10.0kb downstream 10591 true Bd1: 65145704-65156294 Brachypodium distachyon
Bradi1g66090 10.0kb downstream 10.0kb downstream 10000 false Bd1: 65145704-65155703 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584742 5269 Grass View MSA
122042573 5273 Angiosperm View MSA
121347139 5274 Embryophyte View MSA
123380499 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.958     High  
cufflinks 41.24     High  
cufflinks 43.541     High  
cufflinks 64.555     High  
cufflinks 38.956     High  
cufflinks 43.614     High  
cufflinks 56.131     High  
cufflinks 62.276     High  
cufflinks 50.373     High  
cufflinks 133.005     High High
cufflinks 29.219     High  
cufflinks 26.422     High  
cufflinks 45.113     High  
cufflinks 56.79     High  
cufflinks 44.808     High  
cufflinks 40.464     High  
cufflinks 89.393     High  
cufflinks 2.116       Low
cufflinks 68.51     High  
cufflinks 41.257     High  
cufflinks 41.574     High  
cufflinks 43.561     High  
cufflinks 74.973     High  
cufflinks 60.976     High  
cufflinks 66.45     High  
cufflinks 53.86     High  
cufflinks 46.409     High  
cufflinks 98.798     High  
cufflinks 102.275     High  
cufflinks 20.305     High  

0 Strain