Gene : Bradi1g71730 B. distachyon v3.1
Defline:  (1 of 1) PTHR30007//PTHR30007:SF19 - PHP DOMAIN PROTEIN // EXPRESSED PROTEIN Genomic Order:  9072
Name:  ? Bradi1g71730 Secondary Identifier:  ? PAC:32803996
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g71730 0.5kb upstream 0.5kb upstream 4041 true Bd1: 69893421-69897461 Brachypodium distachyon
Bradi1g71730 0.5kb upstream 0.5kb upstream 500 false Bd1: 69893421-69893920 Brachypodium distachyon
Bradi1g71730 0.5kb downstream 0.5kb downstream 4041 true Bd1: 69893921-69897961 Brachypodium distachyon
Bradi1g71730 0.5kb downstream 0.5kb downstream 500 false Bd1: 69897462-69897961 Brachypodium distachyon
Bradi1g71730 1.0kb upstream 1.0kb upstream 4541 true Bd1: 69892921-69897461 Brachypodium distachyon
Bradi1g71730 1.0kb upstream 1.0kb upstream 1000 false Bd1: 69892921-69893920 Brachypodium distachyon
Bradi1g71730 1.0kb downstream 1.0kb downstream 4541 true Bd1: 69893921-69898461 Brachypodium distachyon
Bradi1g71730 1.0kb downstream 1.0kb downstream 1000 false Bd1: 69897462-69898461 Brachypodium distachyon
Bradi1g71730 2.0kb upstream 2.0kb upstream 5541 true Bd1: 69891921-69897461 Brachypodium distachyon
Bradi1g71730 2.0kb upstream 2.0kb upstream 2000 false Bd1: 69891921-69893920 Brachypodium distachyon
Bradi1g71730 2.0kb downstream 2.0kb downstream 5541 true Bd1: 69893921-69899461 Brachypodium distachyon
Bradi1g71730 2.0kb downstream 2.0kb downstream 2000 false Bd1: 69897462-69899461 Brachypodium distachyon
Bradi1g71730 5.0kb upstream 5.0kb upstream 8541 true Bd1: 69888921-69897461 Brachypodium distachyon
Bradi1g71730 5.0kb upstream 5.0kb upstream 5000 false Bd1: 69888921-69893920 Brachypodium distachyon
Bradi1g71730 5.0kb downstream 5.0kb downstream 8541 true Bd1: 69893921-69902461 Brachypodium distachyon
Bradi1g71730 5.0kb downstream 5.0kb downstream 5000 false Bd1: 69897462-69902461 Brachypodium distachyon
Bradi1g71730 10.0kb upstream 10.0kb upstream 13541 true Bd1: 69883921-69897461 Brachypodium distachyon
Bradi1g71730 10.0kb upstream 10.0kb upstream 10000 false Bd1: 69883921-69893920 Brachypodium distachyon
Bradi1g71730 10.0kb downstream 10.0kb downstream 13541 true Bd1: 69893921-69907461 Brachypodium distachyon
Bradi1g71730 10.0kb downstream 10.0kb downstream 10000 false Bd1: 69897462-69907461 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577931 5269 Grass View MSA
122046627 5273 Angiosperm View MSA
121350433 5274 Embryophyte View MSA
123381728 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.576        
cufflinks 2.085        
cufflinks 2.382        
cufflinks 2.655        
cufflinks 1.7        
cufflinks 1.917        
cufflinks 1.9        
cufflinks 1.776        
cufflinks 1.722        
cufflinks 2.862        
cufflinks 1.25       Low
cufflinks 1.844        
cufflinks 1.271       Low
cufflinks 1.386       Low
cufflinks 2.11        
cufflinks 2.131        
cufflinks 2.353        
cufflinks 2.811        
cufflinks 2.892        
cufflinks 1.228       Low
cufflinks 3.25       High
cufflinks 2.292        
cufflinks 1.77        
cufflinks 1.597       Low
cufflinks 1.976        
cufflinks 2.875        
cufflinks 1.933        
cufflinks 2.706        
cufflinks 2.391        
cufflinks 2.788        

0 Strain