Gene : Bradi1g71640 B. distachyon v3.1
Defline:  (1 of 3) K12735 - peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] (PPIL4) Genomic Order:  9062
Name:  ? Bradi1g71640 Secondary Identifier:  ? PAC:32800412
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g71640 0.5kb upstream 0.5kb upstream 2871 true Bd1: 69837909-69840779 Brachypodium distachyon
Bradi1g71640 0.5kb upstream 0.5kb upstream 500 false Bd1: 69840280-69840779 Brachypodium distachyon
Bradi1g71640 0.5kb downstream 0.5kb downstream 2871 true Bd1: 69837409-69840279 Brachypodium distachyon
Bradi1g71640 0.5kb downstream 0.5kb downstream 500 false Bd1: 69837409-69837908 Brachypodium distachyon
Bradi1g71640 1.0kb upstream 1.0kb upstream 3371 true Bd1: 69837909-69841279 Brachypodium distachyon
Bradi1g71640 1.0kb upstream 1.0kb upstream 1000 false Bd1: 69840280-69841279 Brachypodium distachyon
Bradi1g71640 1.0kb downstream 1.0kb downstream 3371 true Bd1: 69836909-69840279 Brachypodium distachyon
Bradi1g71640 1.0kb downstream 1.0kb downstream 1000 false Bd1: 69836909-69837908 Brachypodium distachyon
Bradi1g71640 2.0kb upstream 2.0kb upstream 4371 true Bd1: 69837909-69842279 Brachypodium distachyon
Bradi1g71640 2.0kb upstream 2.0kb upstream 2000 false Bd1: 69840280-69842279 Brachypodium distachyon
Bradi1g71640 2.0kb downstream 2.0kb downstream 4371 true Bd1: 69835909-69840279 Brachypodium distachyon
Bradi1g71640 2.0kb downstream 2.0kb downstream 2000 false Bd1: 69835909-69837908 Brachypodium distachyon
Bradi1g71640 5.0kb upstream 5.0kb upstream 7371 true Bd1: 69837909-69845279 Brachypodium distachyon
Bradi1g71640 5.0kb upstream 5.0kb upstream 5000 false Bd1: 69840280-69845279 Brachypodium distachyon
Bradi1g71640 5.0kb downstream 5.0kb downstream 7371 true Bd1: 69832909-69840279 Brachypodium distachyon
Bradi1g71640 5.0kb downstream 5.0kb downstream 5000 false Bd1: 69832909-69837908 Brachypodium distachyon
Bradi1g71640 10.0kb upstream 10.0kb upstream 12371 true Bd1: 69837909-69850279 Brachypodium distachyon
Bradi1g71640 10.0kb upstream 10.0kb upstream 10000 false Bd1: 69840280-69850279 Brachypodium distachyon
Bradi1g71640 10.0kb downstream 10.0kb downstream 12371 true Bd1: 69827909-69840279 Brachypodium distachyon
Bradi1g71640 10.0kb downstream 10.0kb downstream 10000 false Bd1: 69827909-69837908 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584103 5269 Grass View MSA
122041722 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349576 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low Low
cufflinks 0.084     Low  
cufflinks 0.044     Low Low
cufflinks 0.12        
cufflinks 0.022     Low Low
cufflinks 0.057     Low  
cufflinks 0.093        
cufflinks 0.091        
cufflinks 0.064     Low  
cufflinks 0.084     Low  
cufflinks 0.064     Low  
cufflinks 0.137        
cufflinks 0.214       High
cufflinks 0.063     Low  
cufflinks 0.13        
cufflinks 0.128        
cufflinks 0.283       High
cufflinks 0.042     Low Low
cufflinks 0.085     Low  
cufflinks 0.09     Low  
cufflinks 0.255       High
cufflinks 0.128        
cufflinks 0.125        
cufflinks 0.196        
cufflinks 0.077     Low  
cufflinks 0.042     Low Low
cufflinks 0.136        
cufflinks 0.049     Low Low
cufflinks 0.056     Low  
cufflinks 0.512       High

0 Strain