Gene : Bradi1g71650 B. distachyon v3.1
Defline:  (1 of 1) KOG1740 - Predicted mitochondrial/chloroplast ribosomal protein S17 Genomic Order:  9063
Name:  ? Bradi1g71650 Secondary Identifier:  ? PAC:32803285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g71650 0.5kb upstream 0.5kb upstream 3779 true Bd1: 69841853-69845631 Brachypodium distachyon
Bradi1g71650 0.5kb upstream 0.5kb upstream 500 false Bd1: 69841853-69842352 Brachypodium distachyon
Bradi1g71650 0.5kb downstream 0.5kb downstream 3779 true Bd1: 69842353-69846131 Brachypodium distachyon
Bradi1g71650 0.5kb downstream 0.5kb downstream 500 false Bd1: 69845632-69846131 Brachypodium distachyon
Bradi1g71650 1.0kb upstream 1.0kb upstream 4279 true Bd1: 69841353-69845631 Brachypodium distachyon
Bradi1g71650 1.0kb upstream 1.0kb upstream 1000 false Bd1: 69841353-69842352 Brachypodium distachyon
Bradi1g71650 1.0kb downstream 1.0kb downstream 4279 true Bd1: 69842353-69846631 Brachypodium distachyon
Bradi1g71650 1.0kb downstream 1.0kb downstream 1000 false Bd1: 69845632-69846631 Brachypodium distachyon
Bradi1g71650 2.0kb upstream 2.0kb upstream 5279 true Bd1: 69840353-69845631 Brachypodium distachyon
Bradi1g71650 2.0kb upstream 2.0kb upstream 2000 false Bd1: 69840353-69842352 Brachypodium distachyon
Bradi1g71650 2.0kb downstream 2.0kb downstream 5279 true Bd1: 69842353-69847631 Brachypodium distachyon
Bradi1g71650 2.0kb downstream 2.0kb downstream 2000 false Bd1: 69845632-69847631 Brachypodium distachyon
Bradi1g71650 5.0kb upstream 5.0kb upstream 8279 true Bd1: 69837353-69845631 Brachypodium distachyon
Bradi1g71650 5.0kb upstream 5.0kb upstream 5000 false Bd1: 69837353-69842352 Brachypodium distachyon
Bradi1g71650 5.0kb downstream 5.0kb downstream 8279 true Bd1: 69842353-69850631 Brachypodium distachyon
Bradi1g71650 5.0kb downstream 5.0kb downstream 5000 false Bd1: 69845632-69850631 Brachypodium distachyon
Bradi1g71650 10.0kb upstream 10.0kb upstream 13279 true Bd1: 69832353-69845631 Brachypodium distachyon
Bradi1g71650 10.0kb upstream 10.0kb upstream 10000 false Bd1: 69832353-69842352 Brachypodium distachyon
Bradi1g71650 10.0kb downstream 10.0kb downstream 13279 true Bd1: 69842353-69855631 Brachypodium distachyon
Bradi1g71650 10.0kb downstream 10.0kb downstream 10000 false Bd1: 69845632-69855631 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585036 5269 Grass View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.118     High  
cufflinks 8.292        
cufflinks 6.975        
cufflinks 11.315     High  
cufflinks 9.837     High  
cufflinks 7.423        
cufflinks 7.822        
cufflinks 6.155        
cufflinks 6.771        
cufflinks 10.027        
cufflinks 2.415       Low
cufflinks 6.077        
cufflinks 1.864       Low
cufflinks 2.478       Low
cufflinks 6.211        
cufflinks 6.178        
cufflinks 13.78     High  
cufflinks 11.062        
cufflinks 14.23     High  
cufflinks 10.885        
cufflinks 14.525     High High
cufflinks 5.536        
cufflinks 5.678        
cufflinks 5.103        
cufflinks 9.087        
cufflinks 10.656        
cufflinks 2.764       Low
cufflinks 9.479        
cufflinks 8.24        
cufflinks 12.825     High  

0 Strain