Gene : Bradi1g71860 B. distachyon v3.1
Defline:  (1 of 1) PTHR13929 - 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE Genomic Order:  9087
Name:  ? Bradi1g71860 Secondary Identifier:  ? PAC:32803886
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g71860 0.5kb upstream 0.5kb upstream 3823 true Bd1: 69992945-69996767 Brachypodium distachyon
Bradi1g71860 0.5kb upstream 0.5kb upstream 500 false Bd1: 69992945-69993444 Brachypodium distachyon
Bradi1g71860 0.5kb downstream 0.5kb downstream 3823 true Bd1: 69993445-69997267 Brachypodium distachyon
Bradi1g71860 0.5kb downstream 0.5kb downstream 500 false Bd1: 69996768-69997267 Brachypodium distachyon
Bradi1g71860 1.0kb upstream 1.0kb upstream 4323 true Bd1: 69992445-69996767 Brachypodium distachyon
Bradi1g71860 1.0kb upstream 1.0kb upstream 1000 false Bd1: 69992445-69993444 Brachypodium distachyon
Bradi1g71860 1.0kb downstream 1.0kb downstream 4323 true Bd1: 69993445-69997767 Brachypodium distachyon
Bradi1g71860 1.0kb downstream 1.0kb downstream 1000 false Bd1: 69996768-69997767 Brachypodium distachyon
Bradi1g71860 2.0kb upstream 2.0kb upstream 5323 true Bd1: 69991445-69996767 Brachypodium distachyon
Bradi1g71860 2.0kb upstream 2.0kb upstream 2000 false Bd1: 69991445-69993444 Brachypodium distachyon
Bradi1g71860 2.0kb downstream 2.0kb downstream 5323 true Bd1: 69993445-69998767 Brachypodium distachyon
Bradi1g71860 2.0kb downstream 2.0kb downstream 2000 false Bd1: 69996768-69998767 Brachypodium distachyon
Bradi1g71860 5.0kb upstream 5.0kb upstream 8323 true Bd1: 69988445-69996767 Brachypodium distachyon
Bradi1g71860 5.0kb upstream 5.0kb upstream 5000 false Bd1: 69988445-69993444 Brachypodium distachyon
Bradi1g71860 5.0kb downstream 5.0kb downstream 8323 true Bd1: 69993445-70001767 Brachypodium distachyon
Bradi1g71860 5.0kb downstream 5.0kb downstream 5000 false Bd1: 69996768-70001767 Brachypodium distachyon
Bradi1g71860 10.0kb upstream 10.0kb upstream 13323 true Bd1: 69983445-69996767 Brachypodium distachyon
Bradi1g71860 10.0kb upstream 10.0kb upstream 10000 false Bd1: 69983445-69993444 Brachypodium distachyon
Bradi1g71860 10.0kb downstream 10.0kb downstream 13323 true Bd1: 69993445-70006767 Brachypodium distachyon
Bradi1g71860 10.0kb downstream 10.0kb downstream 10000 false Bd1: 69996768-70006767 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570350 5269 Grass View MSA
122047568 5273 Angiosperm View MSA
121344733 5274 Embryophyte View MSA
123423871 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.437       Low
cufflinks 10.201     High High
cufflinks 11.439     High High
cufflinks 8.557        
cufflinks 1.491       Low
cufflinks 5.622        
cufflinks 7.897        
cufflinks 4.255        
cufflinks 4.25        
cufflinks 8.97       High
cufflinks 3.629        
cufflinks 4.778        
cufflinks 4.008        
cufflinks 2.616        
cufflinks 2.159        
cufflinks 6.153        
cufflinks 4.316        
cufflinks 0.544       Low
cufflinks 6.087        
cufflinks 0.658       Low
cufflinks 1.499       Low
cufflinks 10.705     High High
cufflinks 3.697        
cufflinks 3.127        
cufflinks 5.043        
cufflinks 11.522     High High
cufflinks 2.403        
cufflinks 10.9     High High
cufflinks 10.879     High High
cufflinks 3.801        

0 Strain