Gene : Bradi1g71820 B. distachyon v3.1
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Genomic Order:  9081
Name:  ? Bradi1g71820 Secondary Identifier:  ? PAC:32803207
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g71820 0.5kb upstream 0.5kb upstream 6596 true Bd1: 69968098-69974693 Brachypodium distachyon
Bradi1g71820 0.5kb upstream 0.5kb upstream 500 false Bd1: 69968098-69968597 Brachypodium distachyon
Bradi1g71820 0.5kb downstream 0.5kb downstream 6596 true Bd1: 69968598-69975193 Brachypodium distachyon
Bradi1g71820 0.5kb downstream 0.5kb downstream 500 false Bd1: 69974694-69975193 Brachypodium distachyon
Bradi1g71820 1.0kb upstream 1.0kb upstream 7096 true Bd1: 69967598-69974693 Brachypodium distachyon
Bradi1g71820 1.0kb upstream 1.0kb upstream 1000 false Bd1: 69967598-69968597 Brachypodium distachyon
Bradi1g71820 1.0kb downstream 1.0kb downstream 7096 true Bd1: 69968598-69975693 Brachypodium distachyon
Bradi1g71820 1.0kb downstream 1.0kb downstream 1000 false Bd1: 69974694-69975693 Brachypodium distachyon
Bradi1g71820 2.0kb upstream 2.0kb upstream 8096 true Bd1: 69966598-69974693 Brachypodium distachyon
Bradi1g71820 2.0kb upstream 2.0kb upstream 2000 false Bd1: 69966598-69968597 Brachypodium distachyon
Bradi1g71820 2.0kb downstream 2.0kb downstream 8096 true Bd1: 69968598-69976693 Brachypodium distachyon
Bradi1g71820 2.0kb downstream 2.0kb downstream 2000 false Bd1: 69974694-69976693 Brachypodium distachyon
Bradi1g71820 5.0kb upstream 5.0kb upstream 11096 true Bd1: 69963598-69974693 Brachypodium distachyon
Bradi1g71820 5.0kb upstream 5.0kb upstream 5000 false Bd1: 69963598-69968597 Brachypodium distachyon
Bradi1g71820 5.0kb downstream 5.0kb downstream 11096 true Bd1: 69968598-69979693 Brachypodium distachyon
Bradi1g71820 5.0kb downstream 5.0kb downstream 5000 false Bd1: 69974694-69979693 Brachypodium distachyon
Bradi1g71820 10.0kb upstream 10.0kb upstream 16096 true Bd1: 69958598-69974693 Brachypodium distachyon
Bradi1g71820 10.0kb upstream 10.0kb upstream 10000 false Bd1: 69958598-69968597 Brachypodium distachyon
Bradi1g71820 10.0kb downstream 10.0kb downstream 16096 true Bd1: 69968598-69984693 Brachypodium distachyon
Bradi1g71820 10.0kb downstream 10.0kb downstream 10000 false Bd1: 69974694-69984693 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570345 5269 Grass View MSA
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.626        
cufflinks 0.42        
cufflinks 0.377        
cufflinks 0.467        
cufflinks 1.338       High
cufflinks 0.379        
cufflinks 0.331       Low
cufflinks 0.577        
cufflinks 0.461        
cufflinks 0.816        
cufflinks 0.692        
cufflinks 0.607        
cufflinks 0.408        
cufflinks 0.382        
cufflinks 0.819        
cufflinks 0.327       Low
cufflinks 0.568        
cufflinks 0.526        
cufflinks 1.225       High
cufflinks 2.821       High
cufflinks 0.478        
cufflinks 0.715        
cufflinks 0.728        
cufflinks 0.46        
cufflinks 0.369        
cufflinks 0.472        
cufflinks 0.355        
cufflinks 0.496        
cufflinks 0.664        
cufflinks 0.628        

0 Strain