Gene : Bradi1g72130 B. distachyon v3.1
Defline:  (1 of 1) PTHR12866:SF5 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 Genomic Order:  9114
Name:  ? Bradi1g72130 Secondary Identifier:  ? PAC:32797479
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g72130 0.5kb upstream 0.5kb upstream 10219 true Bd1: 70168362-70178580 Brachypodium distachyon
Bradi1g72130 0.5kb upstream 0.5kb upstream 500 false Bd1: 70178081-70178580 Brachypodium distachyon
Bradi1g72130 0.5kb downstream 0.5kb downstream 10219 true Bd1: 70167862-70178080 Brachypodium distachyon
Bradi1g72130 0.5kb downstream 0.5kb downstream 500 false Bd1: 70167862-70168361 Brachypodium distachyon
Bradi1g72130 1.0kb upstream 1.0kb upstream 10719 true Bd1: 70168362-70179080 Brachypodium distachyon
Bradi1g72130 1.0kb upstream 1.0kb upstream 1000 false Bd1: 70178081-70179080 Brachypodium distachyon
Bradi1g72130 1.0kb downstream 1.0kb downstream 10719 true Bd1: 70167362-70178080 Brachypodium distachyon
Bradi1g72130 1.0kb downstream 1.0kb downstream 1000 false Bd1: 70167362-70168361 Brachypodium distachyon
Bradi1g72130 2.0kb upstream 2.0kb upstream 11719 true Bd1: 70168362-70180080 Brachypodium distachyon
Bradi1g72130 2.0kb upstream 2.0kb upstream 2000 false Bd1: 70178081-70180080 Brachypodium distachyon
Bradi1g72130 2.0kb downstream 2.0kb downstream 11719 true Bd1: 70166362-70178080 Brachypodium distachyon
Bradi1g72130 2.0kb downstream 2.0kb downstream 2000 false Bd1: 70166362-70168361 Brachypodium distachyon
Bradi1g72130 5.0kb upstream 5.0kb upstream 14719 true Bd1: 70168362-70183080 Brachypodium distachyon
Bradi1g72130 5.0kb upstream 5.0kb upstream 5000 false Bd1: 70178081-70183080 Brachypodium distachyon
Bradi1g72130 5.0kb downstream 5.0kb downstream 14719 true Bd1: 70163362-70178080 Brachypodium distachyon
Bradi1g72130 5.0kb downstream 5.0kb downstream 5000 false Bd1: 70163362-70168361 Brachypodium distachyon
Bradi1g72130 10.0kb upstream 10.0kb upstream 19719 true Bd1: 70168362-70188080 Brachypodium distachyon
Bradi1g72130 10.0kb upstream 10.0kb upstream 10000 false Bd1: 70178081-70188080 Brachypodium distachyon
Bradi1g72130 10.0kb downstream 10.0kb downstream 19719 true Bd1: 70158362-70178080 Brachypodium distachyon
Bradi1g72130 10.0kb downstream 10.0kb downstream 10000 false Bd1: 70158362-70168361 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579019 5269 Grass View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.097       Low
cufflinks 0.515        
cufflinks 0.674       High
cufflinks 0.341        
cufflinks 0.07     Low Low
cufflinks 0.421        
cufflinks 0.426        
cufflinks 0.33        
cufflinks 0.453        
cufflinks 0.316        
cufflinks 0.446        
cufflinks 0.46        
cufflinks 0.405        
cufflinks 0.347        
cufflinks 0.147       Low
cufflinks 0.453        
cufflinks 0.19        
cufflinks 0.445        
cufflinks 0.314        
cufflinks 0.093     Low Low
cufflinks 0.254        
cufflinks 0.706       High
cufflinks 0.352        
cufflinks 0.344        
cufflinks 0.306        
cufflinks 0.606        
cufflinks 0.416        
cufflinks 0.685       High
cufflinks 0.654       High
cufflinks 0.423        

0 Strain