Gene : Bradi5g09817 B. distachyon v3.1
Defline:  (1 of 3) 4.1.1.22 - Histidine decarboxylase / L-histidine carboxy-lyase Genomic Order:  1012
Name:  ? Bradi5g09817 Secondary Identifier:  ? PAC:32809018
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g09817 0.5kb upstream 0.5kb upstream 3644 true Bd5: 13275922-13279565 Brachypodium distachyon
Bradi5g09817 0.5kb upstream 0.5kb upstream 500 false Bd5: 13275922-13276421 Brachypodium distachyon
Bradi5g09817 0.5kb downstream 0.5kb downstream 3644 true Bd5: 13276422-13280065 Brachypodium distachyon
Bradi5g09817 0.5kb downstream 0.5kb downstream 500 false Bd5: 13279566-13280065 Brachypodium distachyon
Bradi5g09817 1.0kb upstream 1.0kb upstream 4144 true Bd5: 13275422-13279565 Brachypodium distachyon
Bradi5g09817 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13275422-13276421 Brachypodium distachyon
Bradi5g09817 1.0kb downstream 1.0kb downstream 4144 true Bd5: 13276422-13280565 Brachypodium distachyon
Bradi5g09817 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13279566-13280565 Brachypodium distachyon
Bradi5g09817 2.0kb upstream 2.0kb upstream 5144 true Bd5: 13274422-13279565 Brachypodium distachyon
Bradi5g09817 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13274422-13276421 Brachypodium distachyon
Bradi5g09817 2.0kb downstream 2.0kb downstream 5144 true Bd5: 13276422-13281565 Brachypodium distachyon
Bradi5g09817 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13279566-13281565 Brachypodium distachyon
Bradi5g09817 5.0kb upstream 5.0kb upstream 8144 true Bd5: 13271422-13279565 Brachypodium distachyon
Bradi5g09817 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13271422-13276421 Brachypodium distachyon
Bradi5g09817 5.0kb downstream 5.0kb downstream 8144 true Bd5: 13276422-13284565 Brachypodium distachyon
Bradi5g09817 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13279566-13284565 Brachypodium distachyon
Bradi5g09817 10.0kb upstream 10.0kb upstream 13144 true Bd5: 13266422-13279565 Brachypodium distachyon
Bradi5g09817 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13266422-13276421 Brachypodium distachyon
Bradi5g09817 10.0kb downstream 10.0kb downstream 13144 true Bd5: 13276422-13289565 Brachypodium distachyon
Bradi5g09817 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13279566-13289565 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545314 5269 Grass View MSA
122050239 5273 Angiosperm View MSA
121349588 5274 Embryophyte View MSA
123424735 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.046        
cufflinks 7.624        
cufflinks 7.965        
cufflinks 10.62     High High
cufflinks 3.753        
cufflinks 5.705        
cufflinks 5.388        
cufflinks 4.276        
cufflinks 4.537        
cufflinks 5.004        
cufflinks 0.765       Low
cufflinks 4.354        
cufflinks 1.137       Low
cufflinks 0.595       Low
cufflinks 3.079        
cufflinks 5.626        
cufflinks 6.565        
cufflinks 10.203       High
cufflinks 4.552        
cufflinks 2.664        
cufflinks 6.319        
cufflinks 4.917        
cufflinks 4.045        
cufflinks 3.99        
cufflinks 5.442        
cufflinks 8.18        
cufflinks 0.973       Low
cufflinks 6.527        
cufflinks 5.645        
cufflinks 8.008        

0 Strain