Gene : Bradi1g72850 B. distachyon v3.1
Defline:  (1 of 2) PTHR12419//PTHR12419:SF3 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  9196
Name:  ? Bradi1g72850 Secondary Identifier:  ? PAC:32803001
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g72850 0.5kb upstream 0.5kb upstream 3597 true Bd1: 70712767-70716363 Brachypodium distachyon
Bradi1g72850 0.5kb upstream 0.5kb upstream 500 false Bd1: 70715864-70716363 Brachypodium distachyon
Bradi1g72850 0.5kb downstream 0.5kb downstream 3597 true Bd1: 70712267-70715863 Brachypodium distachyon
Bradi1g72850 0.5kb downstream 0.5kb downstream 500 false Bd1: 70712267-70712766 Brachypodium distachyon
Bradi1g72850 1.0kb upstream 1.0kb upstream 4097 true Bd1: 70712767-70716863 Brachypodium distachyon
Bradi1g72850 1.0kb upstream 1.0kb upstream 1000 false Bd1: 70715864-70716863 Brachypodium distachyon
Bradi1g72850 1.0kb downstream 1.0kb downstream 4097 true Bd1: 70711767-70715863 Brachypodium distachyon
Bradi1g72850 1.0kb downstream 1.0kb downstream 1000 false Bd1: 70711767-70712766 Brachypodium distachyon
Bradi1g72850 2.0kb upstream 2.0kb upstream 5097 true Bd1: 70712767-70717863 Brachypodium distachyon
Bradi1g72850 2.0kb upstream 2.0kb upstream 2000 false Bd1: 70715864-70717863 Brachypodium distachyon
Bradi1g72850 2.0kb downstream 2.0kb downstream 5097 true Bd1: 70710767-70715863 Brachypodium distachyon
Bradi1g72850 2.0kb downstream 2.0kb downstream 2000 false Bd1: 70710767-70712766 Brachypodium distachyon
Bradi1g72850 5.0kb upstream 5.0kb upstream 8097 true Bd1: 70712767-70720863 Brachypodium distachyon
Bradi1g72850 5.0kb upstream 5.0kb upstream 5000 false Bd1: 70715864-70720863 Brachypodium distachyon
Bradi1g72850 5.0kb downstream 5.0kb downstream 8097 true Bd1: 70707767-70715863 Brachypodium distachyon
Bradi1g72850 5.0kb downstream 5.0kb downstream 5000 false Bd1: 70707767-70712766 Brachypodium distachyon
Bradi1g72850 10.0kb upstream 10.0kb upstream 13097 true Bd1: 70712767-70725863 Brachypodium distachyon
Bradi1g72850 10.0kb upstream 10.0kb upstream 10000 false Bd1: 70715864-70725863 Brachypodium distachyon
Bradi1g72850 10.0kb downstream 10.0kb downstream 13097 true Bd1: 70702767-70715863 Brachypodium distachyon
Bradi1g72850 10.0kb downstream 10.0kb downstream 10000 false Bd1: 70702767-70712766 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589614 5269 Grass View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.66        
cufflinks 1.816        
cufflinks 1.795        
cufflinks 1.604        
cufflinks 3.371        
cufflinks 1.567        
cufflinks 1.728        
cufflinks 1.993        
cufflinks 1.545        
cufflinks 2.079        
cufflinks 1.449        
cufflinks 1.957        
cufflinks 1.662        
cufflinks 1.284       Low
cufflinks 2.154        
cufflinks 2.051        
cufflinks 2.011        
cufflinks 3.562       High
cufflinks 5.982       High
cufflinks 9.673       High
cufflinks 2.675        
cufflinks 1.854        
cufflinks 1.869        
cufflinks 1.557        
cufflinks 1.566        
cufflinks 2.241        
cufflinks 2.278        
cufflinks 2.028        
cufflinks 1.583        
cufflinks 2.35        

0 Strain