Gene : Bradi1g73110 B. distachyon v3.1
Defline:  (1 of 1) PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Genomic Order:  9236
Name:  ? Bradi1g73110 Secondary Identifier:  ? PAC:32804434
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g73110 0.5kb upstream 0.5kb upstream 5263 true Bd1: 70948039-70953301 Brachypodium distachyon
Bradi1g73110 0.5kb upstream 0.5kb upstream 500 false Bd1: 70952802-70953301 Brachypodium distachyon
Bradi1g73110 0.5kb downstream 0.5kb downstream 5263 true Bd1: 70947539-70952801 Brachypodium distachyon
Bradi1g73110 0.5kb downstream 0.5kb downstream 500 false Bd1: 70947539-70948038 Brachypodium distachyon
Bradi1g73110 1.0kb upstream 1.0kb upstream 5763 true Bd1: 70948039-70953801 Brachypodium distachyon
Bradi1g73110 1.0kb upstream 1.0kb upstream 1000 false Bd1: 70952802-70953801 Brachypodium distachyon
Bradi1g73110 1.0kb downstream 1.0kb downstream 5763 true Bd1: 70947039-70952801 Brachypodium distachyon
Bradi1g73110 1.0kb downstream 1.0kb downstream 1000 false Bd1: 70947039-70948038 Brachypodium distachyon
Bradi1g73110 2.0kb upstream 2.0kb upstream 6763 true Bd1: 70948039-70954801 Brachypodium distachyon
Bradi1g73110 2.0kb upstream 2.0kb upstream 2000 false Bd1: 70952802-70954801 Brachypodium distachyon
Bradi1g73110 2.0kb downstream 2.0kb downstream 6763 true Bd1: 70946039-70952801 Brachypodium distachyon
Bradi1g73110 2.0kb downstream 2.0kb downstream 2000 false Bd1: 70946039-70948038 Brachypodium distachyon
Bradi1g73110 5.0kb upstream 5.0kb upstream 9763 true Bd1: 70948039-70957801 Brachypodium distachyon
Bradi1g73110 5.0kb upstream 5.0kb upstream 5000 false Bd1: 70952802-70957801 Brachypodium distachyon
Bradi1g73110 5.0kb downstream 5.0kb downstream 9763 true Bd1: 70943039-70952801 Brachypodium distachyon
Bradi1g73110 5.0kb downstream 5.0kb downstream 5000 false Bd1: 70943039-70948038 Brachypodium distachyon
Bradi1g73110 10.0kb upstream 10.0kb upstream 14763 true Bd1: 70948039-70962801 Brachypodium distachyon
Bradi1g73110 10.0kb upstream 10.0kb upstream 10000 false Bd1: 70952802-70962801 Brachypodium distachyon
Bradi1g73110 10.0kb downstream 10.0kb downstream 14763 true Bd1: 70938039-70952801 Brachypodium distachyon
Bradi1g73110 10.0kb downstream 10.0kb downstream 10000 false Bd1: 70938039-70948038 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588760 5269 Grass View MSA
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.096        
cufflinks 11.969     High  
cufflinks 12.482     High High
cufflinks 10.347        
cufflinks 2.606       Low
cufflinks 10.588     High  
cufflinks 9.177        
cufflinks 8.171        
cufflinks 10.126     High  
cufflinks 5.197        
cufflinks 4.973        
cufflinks 9.049        
cufflinks 2.993       Low
cufflinks 3.814        
cufflinks 4.505        
cufflinks 9.994     High  
cufflinks 4.638        
cufflinks 16.78     High High
cufflinks 4.441        
cufflinks 1.399       Low
cufflinks 9.52        
cufflinks 8.968        
cufflinks 7.381        
cufflinks 8.723        
cufflinks 9.082        
cufflinks 8.875        
cufflinks 4.061        
cufflinks 7.453        
cufflinks 7.205        
cufflinks 14.709     High High

0 Strain