Gene : Bradi1g73220 B. distachyon v3.1
Defline:  (1 of 1) 1.4.1.24 - 3-dehydroquinate synthase II / DHQ synthase II Genomic Order:  9248
Name:  ? Bradi1g73220 Secondary Identifier:  ? PAC:32797240
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g73220 0.5kb upstream 0.5kb upstream 8626 true Bd1: 71021024-71029649 Brachypodium distachyon
Bradi1g73220 0.5kb upstream 0.5kb upstream 500 false Bd1: 71029150-71029649 Brachypodium distachyon
Bradi1g73220 0.5kb downstream 0.5kb downstream 8626 true Bd1: 71020524-71029149 Brachypodium distachyon
Bradi1g73220 0.5kb downstream 0.5kb downstream 500 false Bd1: 71020524-71021023 Brachypodium distachyon
Bradi1g73220 1.0kb upstream 1.0kb upstream 9126 true Bd1: 71021024-71030149 Brachypodium distachyon
Bradi1g73220 1.0kb upstream 1.0kb upstream 1000 false Bd1: 71029150-71030149 Brachypodium distachyon
Bradi1g73220 1.0kb downstream 1.0kb downstream 9126 true Bd1: 71020024-71029149 Brachypodium distachyon
Bradi1g73220 1.0kb downstream 1.0kb downstream 1000 false Bd1: 71020024-71021023 Brachypodium distachyon
Bradi1g73220 2.0kb upstream 2.0kb upstream 10126 true Bd1: 71021024-71031149 Brachypodium distachyon
Bradi1g73220 2.0kb upstream 2.0kb upstream 2000 false Bd1: 71029150-71031149 Brachypodium distachyon
Bradi1g73220 2.0kb downstream 2.0kb downstream 10126 true Bd1: 71019024-71029149 Brachypodium distachyon
Bradi1g73220 2.0kb downstream 2.0kb downstream 2000 false Bd1: 71019024-71021023 Brachypodium distachyon
Bradi1g73220 5.0kb upstream 5.0kb upstream 13126 true Bd1: 71021024-71034149 Brachypodium distachyon
Bradi1g73220 5.0kb upstream 5.0kb upstream 5000 false Bd1: 71029150-71034149 Brachypodium distachyon
Bradi1g73220 5.0kb downstream 5.0kb downstream 13126 true Bd1: 71016024-71029149 Brachypodium distachyon
Bradi1g73220 5.0kb downstream 5.0kb downstream 5000 false Bd1: 71016024-71021023 Brachypodium distachyon
Bradi1g73220 10.0kb upstream 10.0kb upstream 18126 true Bd1: 71021024-71039149 Brachypodium distachyon
Bradi1g73220 10.0kb upstream 10.0kb upstream 10000 false Bd1: 71029150-71039149 Brachypodium distachyon
Bradi1g73220 10.0kb downstream 10.0kb downstream 18126 true Bd1: 71011024-71029149 Brachypodium distachyon
Bradi1g73220 10.0kb downstream 10.0kb downstream 10000 false Bd1: 71011024-71021023 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573834 5269 Grass View MSA
122045215 5273 Angiosperm View MSA
121347286 5274 Embryophyte View MSA
123427412 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.442        
cufflinks 0.868       High
cufflinks 0.756        
cufflinks 0.904       High
cufflinks 0.419        
cufflinks 0.698        
cufflinks 0.768       High
cufflinks 0.547        
cufflinks 0.6        
cufflinks 0.483        
cufflinks 0.472        
cufflinks 0.636        
cufflinks 0.476        
cufflinks 0.483        
cufflinks 0.477        
cufflinks 0.614        
cufflinks 0.541        
cufflinks 0.438        
cufflinks 0.671        
cufflinks 0.201       Low
cufflinks 0.486        
cufflinks 0.631        
cufflinks 0.512        
cufflinks 0.633        
cufflinks 0.724        
cufflinks 0.701        
cufflinks 0.309       Low
cufflinks 0.612        
cufflinks 0.607        
cufflinks 0.584        

0 Strain