Gene : Bradi1g74120 B. distachyon v3.1
Defline:  (1 of 1) PTHR11390//PTHR11390:SF21 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE 3-ALPHA Genomic Order:  9318
Name:  ? Bradi1g74120 Secondary Identifier:  ? PAC:32796394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g74120 0.5kb upstream 0.5kb upstream 19142 true Bd1: 71631144-71650285 Brachypodium distachyon
Bradi1g74120 0.5kb upstream 0.5kb upstream 500 false Bd1: 71631144-71631643 Brachypodium distachyon
Bradi1g74120 0.5kb downstream 0.5kb downstream 19142 true Bd1: 71631644-71650785 Brachypodium distachyon
Bradi1g74120 0.5kb downstream 0.5kb downstream 500 false Bd1: 71650286-71650785 Brachypodium distachyon
Bradi1g74120 1.0kb upstream 1.0kb upstream 19642 true Bd1: 71630644-71650285 Brachypodium distachyon
Bradi1g74120 1.0kb upstream 1.0kb upstream 1000 false Bd1: 71630644-71631643 Brachypodium distachyon
Bradi1g74120 1.0kb downstream 1.0kb downstream 19642 true Bd1: 71631644-71651285 Brachypodium distachyon
Bradi1g74120 1.0kb downstream 1.0kb downstream 1000 false Bd1: 71650286-71651285 Brachypodium distachyon
Bradi1g74120 2.0kb upstream 2.0kb upstream 20642 true Bd1: 71629644-71650285 Brachypodium distachyon
Bradi1g74120 2.0kb upstream 2.0kb upstream 2000 false Bd1: 71629644-71631643 Brachypodium distachyon
Bradi1g74120 2.0kb downstream 2.0kb downstream 20642 true Bd1: 71631644-71652285 Brachypodium distachyon
Bradi1g74120 2.0kb downstream 2.0kb downstream 2000 false Bd1: 71650286-71652285 Brachypodium distachyon
Bradi1g74120 5.0kb upstream 5.0kb upstream 23642 true Bd1: 71626644-71650285 Brachypodium distachyon
Bradi1g74120 5.0kb upstream 5.0kb upstream 5000 false Bd1: 71626644-71631643 Brachypodium distachyon
Bradi1g74120 5.0kb downstream 5.0kb downstream 23642 true Bd1: 71631644-71655285 Brachypodium distachyon
Bradi1g74120 5.0kb downstream 5.0kb downstream 5000 false Bd1: 71650286-71655285 Brachypodium distachyon
Bradi1g74120 10.0kb upstream 10.0kb upstream 28642 true Bd1: 71621644-71650285 Brachypodium distachyon
Bradi1g74120 10.0kb upstream 10.0kb upstream 10000 false Bd1: 71621644-71631643 Brachypodium distachyon
Bradi1g74120 10.0kb downstream 10.0kb downstream 28642 true Bd1: 71631644-71660285 Brachypodium distachyon
Bradi1g74120 10.0kb downstream 10.0kb downstream 10000 false Bd1: 71650286-71660285 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041072 5273 Angiosperm View MSA
124571003 5269 Grass View MSA
121346575 5274 Embryophyte View MSA
123425013 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.209        
cufflinks 0.523       High
cufflinks 0.451        
cufflinks 0.402        
cufflinks 0.084     Low Low
cufflinks 0.491       High
cufflinks 0.431        
cufflinks 0.364        
cufflinks 0.47        
cufflinks 0.219        
cufflinks 0.633       High
cufflinks 0.347        
cufflinks 0.279        
cufflinks 0.318        
cufflinks 0.165        
cufflinks 0.515       High
cufflinks 0.197        
cufflinks 0.324        
cufflinks 0.14     Low  
cufflinks 0.03     Low Low
cufflinks 0.123        
cufflinks 0.401        
cufflinks 0.357        
cufflinks 0.352        
cufflinks 0.392        
cufflinks 0.358        
cufflinks 0.202        
cufflinks 0.338        
cufflinks 0.333        
cufflinks 0.228        

0 Strain