Gene : Bradi1g74000 B. distachyon v3.1
Defline:  (1 of 1) KOG1887 - Ubiquitin carboxyl-terminal hydrolase Genomic Order:  9305
Name:  ? Bradi1g74000 Secondary Identifier:  ? PAC:32803973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g74000 0.5kb upstream 0.5kb upstream 12288 true Bd1: 71531416-71543703 Brachypodium distachyon
Bradi1g74000 0.5kb upstream 0.5kb upstream 500 false Bd1: 71531416-71531915 Brachypodium distachyon
Bradi1g74000 0.5kb downstream 0.5kb downstream 12288 true Bd1: 71531916-71544203 Brachypodium distachyon
Bradi1g74000 0.5kb downstream 0.5kb downstream 500 false Bd1: 71543704-71544203 Brachypodium distachyon
Bradi1g74000 1.0kb upstream 1.0kb upstream 12788 true Bd1: 71530916-71543703 Brachypodium distachyon
Bradi1g74000 1.0kb upstream 1.0kb upstream 1000 false Bd1: 71530916-71531915 Brachypodium distachyon
Bradi1g74000 1.0kb downstream 1.0kb downstream 12788 true Bd1: 71531916-71544703 Brachypodium distachyon
Bradi1g74000 1.0kb downstream 1.0kb downstream 1000 false Bd1: 71543704-71544703 Brachypodium distachyon
Bradi1g74000 2.0kb upstream 2.0kb upstream 13788 true Bd1: 71529916-71543703 Brachypodium distachyon
Bradi1g74000 2.0kb upstream 2.0kb upstream 2000 false Bd1: 71529916-71531915 Brachypodium distachyon
Bradi1g74000 2.0kb downstream 2.0kb downstream 13788 true Bd1: 71531916-71545703 Brachypodium distachyon
Bradi1g74000 2.0kb downstream 2.0kb downstream 2000 false Bd1: 71543704-71545703 Brachypodium distachyon
Bradi1g74000 5.0kb upstream 5.0kb upstream 16788 true Bd1: 71526916-71543703 Brachypodium distachyon
Bradi1g74000 5.0kb upstream 5.0kb upstream 5000 false Bd1: 71526916-71531915 Brachypodium distachyon
Bradi1g74000 5.0kb downstream 5.0kb downstream 16788 true Bd1: 71531916-71548703 Brachypodium distachyon
Bradi1g74000 5.0kb downstream 5.0kb downstream 5000 false Bd1: 71543704-71548703 Brachypodium distachyon
Bradi1g74000 10.0kb upstream 10.0kb upstream 21788 true Bd1: 71521916-71543703 Brachypodium distachyon
Bradi1g74000 10.0kb upstream 10.0kb upstream 10000 false Bd1: 71521916-71531915 Brachypodium distachyon
Bradi1g74000 10.0kb downstream 10.0kb downstream 21788 true Bd1: 71531916-71553703 Brachypodium distachyon
Bradi1g74000 10.0kb downstream 10.0kb downstream 10000 false Bd1: 71543704-71553703 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575624 5269 Grass View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.323        
cufflinks 15.406     High  
cufflinks 15.999     High  
cufflinks 11.063     High  
cufflinks 6.818       Low
cufflinks 13.6     High  
cufflinks 12.095     High  
cufflinks 11.211     High  
cufflinks 13.987     High  
cufflinks 9.073        
cufflinks 9.84     High  
cufflinks 14.894     High  
cufflinks 9.078     High  
cufflinks 7.135        
cufflinks 7.221        
cufflinks 13.278     High  
cufflinks 6.521       Low
cufflinks 20.706     High High
cufflinks 10.52        
cufflinks 9.038        
cufflinks 8.312        
cufflinks 17.162     High High
cufflinks 11.404     High  
cufflinks 10.924     High  
cufflinks 10.95     High  
cufflinks 13.817     High  
cufflinks 10.557     High  
cufflinks 13.637     High  
cufflinks 14.222     High  
cufflinks 14.592     High  

0 Strain