Gene : Bradi5g08868 B. distachyon v3.1
Genomic Order:  875 Name:  ? Bradi5g08868
Secondary Identifier:  ? PAC:32809277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g08868 0.5kb upstream 0.5kb upstream 1735 true Bd5: 12106596-12108330 Brachypodium distachyon
Bradi5g08868 0.5kb upstream 0.5kb upstream 500 false Bd5: 12106596-12107095 Brachypodium distachyon
Bradi5g08868 0.5kb downstream 0.5kb downstream 1735 true Bd5: 12107096-12108830 Brachypodium distachyon
Bradi5g08868 0.5kb downstream 0.5kb downstream 500 false Bd5: 12108331-12108830 Brachypodium distachyon
Bradi5g08868 1.0kb upstream 1.0kb upstream 2235 true Bd5: 12106096-12108330 Brachypodium distachyon
Bradi5g08868 1.0kb upstream 1.0kb upstream 1000 false Bd5: 12106096-12107095 Brachypodium distachyon
Bradi5g08868 1.0kb downstream 1.0kb downstream 2235 true Bd5: 12107096-12109330 Brachypodium distachyon
Bradi5g08868 1.0kb downstream 1.0kb downstream 1000 false Bd5: 12108331-12109330 Brachypodium distachyon
Bradi5g08868 2.0kb upstream 2.0kb upstream 3235 true Bd5: 12105096-12108330 Brachypodium distachyon
Bradi5g08868 2.0kb upstream 2.0kb upstream 2000 false Bd5: 12105096-12107095 Brachypodium distachyon
Bradi5g08868 2.0kb downstream 2.0kb downstream 3235 true Bd5: 12107096-12110330 Brachypodium distachyon
Bradi5g08868 2.0kb downstream 2.0kb downstream 2000 false Bd5: 12108331-12110330 Brachypodium distachyon
Bradi5g08868 5.0kb upstream 5.0kb upstream 6235 true Bd5: 12102096-12108330 Brachypodium distachyon
Bradi5g08868 5.0kb upstream 5.0kb upstream 5000 false Bd5: 12102096-12107095 Brachypodium distachyon
Bradi5g08868 5.0kb downstream 5.0kb downstream 6235 true Bd5: 12107096-12113330 Brachypodium distachyon
Bradi5g08868 5.0kb downstream 5.0kb downstream 5000 false Bd5: 12108331-12113330 Brachypodium distachyon
Bradi5g08868 10.0kb upstream 10.0kb upstream 11235 true Bd5: 12097096-12108330 Brachypodium distachyon
Bradi5g08868 10.0kb upstream 10.0kb upstream 10000 false Bd5: 12097096-12107095 Brachypodium distachyon
Bradi5g08868 10.0kb downstream 10.0kb downstream 11235 true Bd5: 12107096-12118330 Brachypodium distachyon
Bradi5g08868 10.0kb downstream 10.0kb downstream 10000 false Bd5: 12108331-12118330 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121902266 5273 Angiosperm Singleton cluster - no MSA
124475271 5269 Grass Singleton cluster - no MSA
121172787 5274 Embryophyte Singleton cluster - no MSA
123211657 5275 Viridiplantae Singleton cluster - no MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.019        
cufflinks 13.224     High  
cufflinks 13.379     High  
cufflinks 16.477     High  
cufflinks 10.932     High  
cufflinks 13.184     High  
cufflinks 12.864     High  
cufflinks 9.223     High  
cufflinks 11.868     High  
cufflinks 13.757     High  
cufflinks 1.648       Low
cufflinks 9.365     High  
cufflinks 0.601       Low
cufflinks 2.468       Low
cufflinks 4.335        
cufflinks 10.68     High  
cufflinks 18.921     High  
cufflinks 13.839     High  
cufflinks 13.755     High  
cufflinks 6.598        
cufflinks 30.792     High High
cufflinks 10.25     High  
cufflinks 8.415        
cufflinks 10.258     High  
cufflinks 14.083     High  
cufflinks 18.649     High  
cufflinks 2.818       Low
cufflinks 13.393     High  
cufflinks 12.007     High  
cufflinks 21.184     High High

0 Strain