Gene : Bradi1g69360 B. distachyon v3.1
Defline:  (1 of 1) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Genomic Order:  8776
Name:  ? Bradi1g69360 Secondary Identifier:  ? PAC:32799261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g69360 0.5kb upstream 0.5kb upstream 7870 true Bd1: 68014813-68022682 Brachypodium distachyon
Bradi1g69360 0.5kb upstream 0.5kb upstream 500 false Bd1: 68022183-68022682 Brachypodium distachyon
Bradi1g69360 0.5kb downstream 0.5kb downstream 7870 true Bd1: 68014313-68022182 Brachypodium distachyon
Bradi1g69360 0.5kb downstream 0.5kb downstream 500 false Bd1: 68014313-68014812 Brachypodium distachyon
Bradi1g69360 1.0kb upstream 1.0kb upstream 8370 true Bd1: 68014813-68023182 Brachypodium distachyon
Bradi1g69360 1.0kb upstream 1.0kb upstream 1000 false Bd1: 68022183-68023182 Brachypodium distachyon
Bradi1g69360 1.0kb downstream 1.0kb downstream 8370 true Bd1: 68013813-68022182 Brachypodium distachyon
Bradi1g69360 1.0kb downstream 1.0kb downstream 1000 false Bd1: 68013813-68014812 Brachypodium distachyon
Bradi1g69360 2.0kb upstream 2.0kb upstream 9370 true Bd1: 68014813-68024182 Brachypodium distachyon
Bradi1g69360 2.0kb upstream 2.0kb upstream 2000 false Bd1: 68022183-68024182 Brachypodium distachyon
Bradi1g69360 2.0kb downstream 2.0kb downstream 9370 true Bd1: 68012813-68022182 Brachypodium distachyon
Bradi1g69360 2.0kb downstream 2.0kb downstream 2000 false Bd1: 68012813-68014812 Brachypodium distachyon
Bradi1g69360 5.0kb upstream 5.0kb upstream 12370 true Bd1: 68014813-68027182 Brachypodium distachyon
Bradi1g69360 5.0kb upstream 5.0kb upstream 5000 false Bd1: 68022183-68027182 Brachypodium distachyon
Bradi1g69360 5.0kb downstream 5.0kb downstream 12370 true Bd1: 68009813-68022182 Brachypodium distachyon
Bradi1g69360 5.0kb downstream 5.0kb downstream 5000 false Bd1: 68009813-68014812 Brachypodium distachyon
Bradi1g69360 10.0kb upstream 10.0kb upstream 17370 true Bd1: 68014813-68032182 Brachypodium distachyon
Bradi1g69360 10.0kb upstream 10.0kb upstream 10000 false Bd1: 68022183-68032182 Brachypodium distachyon
Bradi1g69360 10.0kb downstream 10.0kb downstream 17370 true Bd1: 68004813-68022182 Brachypodium distachyon
Bradi1g69360 10.0kb downstream 10.0kb downstream 10000 false Bd1: 68004813-68014812 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577192 5269 Grass View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.446        
cufflinks 3.476       High
cufflinks 2.977        
cufflinks 2.443        
cufflinks 0.799       Low
cufflinks 2.822        
cufflinks 2.557        
cufflinks 1.979        
cufflinks 2.628        
cufflinks 1.298        
cufflinks 1.504        
cufflinks 2.518        
cufflinks 0.883       Low
cufflinks 0.919       Low
cufflinks 0.91       Low
cufflinks 2.756        
cufflinks 1.316        
cufflinks 4.444       High
cufflinks 1.653        
cufflinks 0.506       Low
cufflinks 1.864        
cufflinks 2.589        
cufflinks 2.032        
cufflinks 1.905        
cufflinks 2.271        
cufflinks 2.105        
cufflinks 1.245        
cufflinks 2.027        
cufflinks 2.206        
cufflinks 3.276       High

0 Strain