Gene : Bradi5g10650 B. distachyon v3.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF53 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1121
Name:  ? Bradi5g10650 Secondary Identifier:  ? PAC:32808591
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7511 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10650 0.5kb upstream 0.5kb upstream 2551 true Bd5: 14059956-14062506 Brachypodium distachyon
Bradi5g10650 0.5kb upstream 0.5kb upstream 500 false Bd5: 14059956-14060455 Brachypodium distachyon
Bradi5g10650 0.5kb downstream 0.5kb downstream 2551 true Bd5: 14060456-14063006 Brachypodium distachyon
Bradi5g10650 0.5kb downstream 0.5kb downstream 500 false Bd5: 14062507-14063006 Brachypodium distachyon
Bradi5g10650 1.0kb upstream 1.0kb upstream 3051 true Bd5: 14059456-14062506 Brachypodium distachyon
Bradi5g10650 1.0kb upstream 1.0kb upstream 1000 false Bd5: 14059456-14060455 Brachypodium distachyon
Bradi5g10650 1.0kb downstream 1.0kb downstream 3051 true Bd5: 14060456-14063506 Brachypodium distachyon
Bradi5g10650 1.0kb downstream 1.0kb downstream 1000 false Bd5: 14062507-14063506 Brachypodium distachyon
Bradi5g10650 2.0kb upstream 2.0kb upstream 4051 true Bd5: 14058456-14062506 Brachypodium distachyon
Bradi5g10650 2.0kb upstream 2.0kb upstream 2000 false Bd5: 14058456-14060455 Brachypodium distachyon
Bradi5g10650 2.0kb downstream 2.0kb downstream 4051 true Bd5: 14060456-14064506 Brachypodium distachyon
Bradi5g10650 2.0kb downstream 2.0kb downstream 2000 false Bd5: 14062507-14064506 Brachypodium distachyon
Bradi5g10650 5.0kb upstream 5.0kb upstream 7051 true Bd5: 14055456-14062506 Brachypodium distachyon
Bradi5g10650 5.0kb upstream 5.0kb upstream 5000 false Bd5: 14055456-14060455 Brachypodium distachyon
Bradi5g10650 5.0kb downstream 5.0kb downstream 7051 true Bd5: 14060456-14067506 Brachypodium distachyon
Bradi5g10650 5.0kb downstream 5.0kb downstream 5000 false Bd5: 14062507-14067506 Brachypodium distachyon
Bradi5g10650 10.0kb upstream 10.0kb upstream 12051 true Bd5: 14050456-14062506 Brachypodium distachyon
Bradi5g10650 10.0kb upstream 10.0kb upstream 10000 false Bd5: 14050456-14060455 Brachypodium distachyon
Bradi5g10650 10.0kb downstream 10.0kb downstream 12051 true Bd5: 14060456-14072506 Brachypodium distachyon
Bradi5g10650 10.0kb downstream 10.0kb downstream 10000 false Bd5: 14062507-14072506 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572452 5269 Grass View MSA
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low  
cufflinks 0.082     Low  
cufflinks 0.071     Low  
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.044     Low  
cufflinks 0.043     Low  
cufflinks 0.049     Low  
cufflinks 0.057     Low  
cufflinks 0.016     Low Low
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.024     Low  
cufflinks 0.021     Low  
cufflinks 0.471       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.014     Low Low
cufflinks 0.05     Low  
cufflinks 0.061     Low  
cufflinks 0.024     Low  
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.088     Low  
cufflinks 0.057     Low  
cufflinks 0.048     Low  

0 Strain