Gene : Bradi1g69420 B. distachyon v3.1
Defline:  (1 of 2) PTHR10788:SF48 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 Genomic Order:  8784
Name:  ? Bradi1g69420 Secondary Identifier:  ? PAC:32792260
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g69420 0.5kb upstream 0.5kb upstream 5374 true Bd1: 68065198-68070571 Brachypodium distachyon
Bradi1g69420 0.5kb upstream 0.5kb upstream 500 false Bd1: 68065198-68065697 Brachypodium distachyon
Bradi1g69420 0.5kb downstream 0.5kb downstream 5374 true Bd1: 68065698-68071071 Brachypodium distachyon
Bradi1g69420 0.5kb downstream 0.5kb downstream 500 false Bd1: 68070572-68071071 Brachypodium distachyon
Bradi1g69420 1.0kb upstream 1.0kb upstream 5874 true Bd1: 68064698-68070571 Brachypodium distachyon
Bradi1g69420 1.0kb upstream 1.0kb upstream 1000 false Bd1: 68064698-68065697 Brachypodium distachyon
Bradi1g69420 1.0kb downstream 1.0kb downstream 5874 true Bd1: 68065698-68071571 Brachypodium distachyon
Bradi1g69420 1.0kb downstream 1.0kb downstream 1000 false Bd1: 68070572-68071571 Brachypodium distachyon
Bradi1g69420 2.0kb upstream 2.0kb upstream 6874 true Bd1: 68063698-68070571 Brachypodium distachyon
Bradi1g69420 2.0kb upstream 2.0kb upstream 2000 false Bd1: 68063698-68065697 Brachypodium distachyon
Bradi1g69420 2.0kb downstream 2.0kb downstream 6874 true Bd1: 68065698-68072571 Brachypodium distachyon
Bradi1g69420 2.0kb downstream 2.0kb downstream 2000 false Bd1: 68070572-68072571 Brachypodium distachyon
Bradi1g69420 5.0kb upstream 5.0kb upstream 9874 true Bd1: 68060698-68070571 Brachypodium distachyon
Bradi1g69420 5.0kb upstream 5.0kb upstream 5000 false Bd1: 68060698-68065697 Brachypodium distachyon
Bradi1g69420 5.0kb downstream 5.0kb downstream 9874 true Bd1: 68065698-68075571 Brachypodium distachyon
Bradi1g69420 5.0kb downstream 5.0kb downstream 5000 false Bd1: 68070572-68075571 Brachypodium distachyon
Bradi1g69420 10.0kb upstream 10.0kb upstream 14874 true Bd1: 68055698-68070571 Brachypodium distachyon
Bradi1g69420 10.0kb upstream 10.0kb upstream 10000 false Bd1: 68055698-68065697 Brachypodium distachyon
Bradi1g69420 10.0kb downstream 10.0kb downstream 14874 true Bd1: 68065698-68080571 Brachypodium distachyon
Bradi1g69420 10.0kb downstream 10.0kb downstream 10000 false Bd1: 68070572-68080571 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572000 5269 Grass View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.611       High
cufflinks 2.94       High
cufflinks 1.317        
cufflinks 1.768        
cufflinks 0.536       Low
cufflinks 1.851        
cufflinks 2.621       High
cufflinks 0.766        
cufflinks 1.365        
cufflinks 0.402       Low
cufflinks 0.85        
cufflinks 1.451        
cufflinks 1.166        
cufflinks 0.47       Low
cufflinks 1.135        
cufflinks 1.883        
cufflinks 0.746        
cufflinks 3.01       High
cufflinks 2.104        
cufflinks 0.29       Low
cufflinks 2.123        
cufflinks 0.655        
cufflinks 0.805        
cufflinks 1.235        
cufflinks 1.568        
cufflinks 0.962        
cufflinks 0.807        
cufflinks 0.893        
cufflinks 0.769        
cufflinks 2.554       High

0 Strain