Gene : Bradi5g10400 B. distachyon v3.1
Defline:  (1 of 1) PTHR21389 - P53 INDUCED PROTEIN Genomic Order:  1083
Name:  ? Bradi5g10400 Secondary Identifier:  ? PAC:32807454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10400 0.5kb upstream 0.5kb upstream 8001 true Bd5: 13763501-13771501 Brachypodium distachyon
Bradi5g10400 0.5kb upstream 0.5kb upstream 500 false Bd5: 13763501-13764000 Brachypodium distachyon
Bradi5g10400 0.5kb downstream 0.5kb downstream 8001 true Bd5: 13764001-13772001 Brachypodium distachyon
Bradi5g10400 0.5kb downstream 0.5kb downstream 500 false Bd5: 13771502-13772001 Brachypodium distachyon
Bradi5g10400 1.0kb upstream 1.0kb upstream 8501 true Bd5: 13763001-13771501 Brachypodium distachyon
Bradi5g10400 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13763001-13764000 Brachypodium distachyon
Bradi5g10400 1.0kb downstream 1.0kb downstream 8501 true Bd5: 13764001-13772501 Brachypodium distachyon
Bradi5g10400 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13771502-13772501 Brachypodium distachyon
Bradi5g10400 2.0kb upstream 2.0kb upstream 9501 true Bd5: 13762001-13771501 Brachypodium distachyon
Bradi5g10400 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13762001-13764000 Brachypodium distachyon
Bradi5g10400 2.0kb downstream 2.0kb downstream 9501 true Bd5: 13764001-13773501 Brachypodium distachyon
Bradi5g10400 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13771502-13773501 Brachypodium distachyon
Bradi5g10400 5.0kb upstream 5.0kb upstream 12501 true Bd5: 13759001-13771501 Brachypodium distachyon
Bradi5g10400 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13759001-13764000 Brachypodium distachyon
Bradi5g10400 5.0kb downstream 5.0kb downstream 12501 true Bd5: 13764001-13776501 Brachypodium distachyon
Bradi5g10400 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13771502-13776501 Brachypodium distachyon
Bradi5g10400 10.0kb upstream 10.0kb upstream 17501 true Bd5: 13754001-13771501 Brachypodium distachyon
Bradi5g10400 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13754001-13764000 Brachypodium distachyon
Bradi5g10400 10.0kb downstream 10.0kb downstream 17501 true Bd5: 13764001-13781501 Brachypodium distachyon
Bradi5g10400 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13771502-13781501 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572632 5269 Grass View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.957        
cufflinks 2.596        
cufflinks 2.619        
cufflinks 2.405        
cufflinks 1.682       Low
cufflinks 2.015        
cufflinks 2.121        
cufflinks 2.174        
cufflinks 2.127        
cufflinks 2.489        
cufflinks 2.165        
cufflinks 2.063        
cufflinks 2.479        
cufflinks 1.894        
cufflinks 2.121        
cufflinks 2.014        
cufflinks 2.408        
cufflinks 3.197       High
cufflinks 3.882       High
cufflinks 2.073        
cufflinks 3.075       High
cufflinks 2.665        
cufflinks 2.11        
cufflinks 1.891        
cufflinks 2.076        
cufflinks 2.729        
cufflinks 2.525        
cufflinks 2.746        
cufflinks 2.746        
cufflinks 2.28        

0 Strain