Gene : Bradi1g69880 B. distachyon v3.1
Defline:  (1 of 3) K01874 - methionyl-tRNA synthetase (MARS, metG) Genomic Order:  8845
Name:  ? Bradi1g69880 Secondary Identifier:  ? PAC:32804850
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon TRNA-CHARGING-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g69880 0.5kb upstream 0.5kb upstream 5843 true Bd1: 68532044-68537886 Brachypodium distachyon
Bradi1g69880 0.5kb upstream 0.5kb upstream 500 false Bd1: 68532044-68532543 Brachypodium distachyon
Bradi1g69880 0.5kb downstream 0.5kb downstream 5843 true Bd1: 68532544-68538386 Brachypodium distachyon
Bradi1g69880 0.5kb downstream 0.5kb downstream 500 false Bd1: 68537887-68538386 Brachypodium distachyon
Bradi1g69880 1.0kb upstream 1.0kb upstream 6343 true Bd1: 68531544-68537886 Brachypodium distachyon
Bradi1g69880 1.0kb upstream 1.0kb upstream 1000 false Bd1: 68531544-68532543 Brachypodium distachyon
Bradi1g69880 1.0kb downstream 1.0kb downstream 6343 true Bd1: 68532544-68538886 Brachypodium distachyon
Bradi1g69880 1.0kb downstream 1.0kb downstream 1000 false Bd1: 68537887-68538886 Brachypodium distachyon
Bradi1g69880 2.0kb upstream 2.0kb upstream 7343 true Bd1: 68530544-68537886 Brachypodium distachyon
Bradi1g69880 2.0kb upstream 2.0kb upstream 2000 false Bd1: 68530544-68532543 Brachypodium distachyon
Bradi1g69880 2.0kb downstream 2.0kb downstream 7343 true Bd1: 68532544-68539886 Brachypodium distachyon
Bradi1g69880 2.0kb downstream 2.0kb downstream 2000 false Bd1: 68537887-68539886 Brachypodium distachyon
Bradi1g69880 5.0kb upstream 5.0kb upstream 10343 true Bd1: 68527544-68537886 Brachypodium distachyon
Bradi1g69880 5.0kb upstream 5.0kb upstream 5000 false Bd1: 68527544-68532543 Brachypodium distachyon
Bradi1g69880 5.0kb downstream 5.0kb downstream 10343 true Bd1: 68532544-68542886 Brachypodium distachyon
Bradi1g69880 5.0kb downstream 5.0kb downstream 5000 false Bd1: 68537887-68542886 Brachypodium distachyon
Bradi1g69880 10.0kb upstream 10.0kb upstream 15343 true Bd1: 68522544-68537886 Brachypodium distachyon
Bradi1g69880 10.0kb upstream 10.0kb upstream 10000 false Bd1: 68522544-68532543 Brachypodium distachyon
Bradi1g69880 10.0kb downstream 10.0kb downstream 15343 true Bd1: 68532544-68547886 Brachypodium distachyon
Bradi1g69880 10.0kb downstream 10.0kb downstream 10000 false Bd1: 68537887-68547886 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574328 5269 Grass View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.249     High  
cufflinks 27.138     High  
cufflinks 25.616     High  
cufflinks 22.934     High  
cufflinks 8.295       Low
cufflinks 23.635     High  
cufflinks 21.531     High  
cufflinks 19.014     High  
cufflinks 22.7     High  
cufflinks 12.927     High  
cufflinks 13.318     High  
cufflinks 22.391     High  
cufflinks 9.465     High  
cufflinks 10.16     High  
cufflinks 11.3     High  
cufflinks 24.001     High  
cufflinks 17.177     High  
cufflinks 38.006     High High
cufflinks 15.261     High  
cufflinks 3.485       Low
cufflinks 18.344     High  
cufflinks 21.617     High  
cufflinks 18.209     High  
cufflinks 18.992     High  
cufflinks 20.69     High  
cufflinks 19.942     High  
cufflinks 13.254     High  
cufflinks 18.113     High  
cufflinks 18.868     High  
cufflinks 26.031     High  

0 Strain