Gene : Bradi5g10320 B. distachyon v3.1
Defline:  (1 of 63) PF03514 - GRAS domain family (GRAS) Genomic Order:  1074
Name:  ? Bradi5g10320 Secondary Identifier:  ? PAC:32807902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10320 0.5kb upstream 0.5kb upstream 2369 true Bd5: 13672150-13674518 Brachypodium distachyon
Bradi5g10320 0.5kb upstream 0.5kb upstream 500 false Bd5: 13674019-13674518 Brachypodium distachyon
Bradi5g10320 0.5kb downstream 0.5kb downstream 2369 true Bd5: 13671650-13674018 Brachypodium distachyon
Bradi5g10320 0.5kb downstream 0.5kb downstream 500 false Bd5: 13671650-13672149 Brachypodium distachyon
Bradi5g10320 1.0kb upstream 1.0kb upstream 2869 true Bd5: 13672150-13675018 Brachypodium distachyon
Bradi5g10320 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13674019-13675018 Brachypodium distachyon
Bradi5g10320 1.0kb downstream 1.0kb downstream 2869 true Bd5: 13671150-13674018 Brachypodium distachyon
Bradi5g10320 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13671150-13672149 Brachypodium distachyon
Bradi5g10320 2.0kb upstream 2.0kb upstream 3869 true Bd5: 13672150-13676018 Brachypodium distachyon
Bradi5g10320 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13674019-13676018 Brachypodium distachyon
Bradi5g10320 2.0kb downstream 2.0kb downstream 3869 true Bd5: 13670150-13674018 Brachypodium distachyon
Bradi5g10320 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13670150-13672149 Brachypodium distachyon
Bradi5g10320 5.0kb upstream 5.0kb upstream 6869 true Bd5: 13672150-13679018 Brachypodium distachyon
Bradi5g10320 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13674019-13679018 Brachypodium distachyon
Bradi5g10320 5.0kb downstream 5.0kb downstream 6869 true Bd5: 13667150-13674018 Brachypodium distachyon
Bradi5g10320 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13667150-13672149 Brachypodium distachyon
Bradi5g10320 10.0kb upstream 10.0kb upstream 11869 true Bd5: 13672150-13684018 Brachypodium distachyon
Bradi5g10320 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13674019-13684018 Brachypodium distachyon
Bradi5g10320 10.0kb downstream 10.0kb downstream 11869 true Bd5: 13662150-13674018 Brachypodium distachyon
Bradi5g10320 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13662150-13672149 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579769 5269 Grass View MSA
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.185        
cufflinks 0.03     Low Low
cufflinks 0.06     Low  
cufflinks 0.082     Low  
cufflinks 0.092        
cufflinks 0.047     Low  
cufflinks 0.058     Low  
cufflinks 0.039     Low  
cufflinks 0.027     Low Low
cufflinks 0.136        
cufflinks 0.093        
cufflinks 0.162        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low Low
cufflinks 0.147        
cufflinks 0.046     Low  
cufflinks 0.864       High
cufflinks 0.213        
cufflinks 0.522       High
cufflinks 0.217        
cufflinks 0.049     Low  
cufflinks 0.075     Low  
cufflinks 0.09     Low  
cufflinks 0.055     Low  
cufflinks 0.077     Low  
cufflinks 0.081     Low  
cufflinks 0.122        
cufflinks 0.056     Low  
cufflinks 0.162        

0 Strain