Gene : Bradi5g10310 B. distachyon v3.1
Defline:  (1 of 2) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  1073
Name:  ? Bradi5g10310 Secondary Identifier:  ? PAC:32807622
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6121 Brachypodium distachyon pathologic  
Bdistachyon PWY-6613 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10310 0.5kb upstream 0.5kb upstream 4483 true Bd5: 13664174-13668656 Brachypodium distachyon
Bradi5g10310 0.5kb upstream 0.5kb upstream 500 false Bd5: 13668157-13668656 Brachypodium distachyon
Bradi5g10310 0.5kb downstream 0.5kb downstream 4483 true Bd5: 13663674-13668156 Brachypodium distachyon
Bradi5g10310 0.5kb downstream 0.5kb downstream 500 false Bd5: 13663674-13664173 Brachypodium distachyon
Bradi5g10310 1.0kb upstream 1.0kb upstream 4983 true Bd5: 13664174-13669156 Brachypodium distachyon
Bradi5g10310 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13668157-13669156 Brachypodium distachyon
Bradi5g10310 1.0kb downstream 1.0kb downstream 4983 true Bd5: 13663174-13668156 Brachypodium distachyon
Bradi5g10310 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13663174-13664173 Brachypodium distachyon
Bradi5g10310 2.0kb upstream 2.0kb upstream 5983 true Bd5: 13664174-13670156 Brachypodium distachyon
Bradi5g10310 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13668157-13670156 Brachypodium distachyon
Bradi5g10310 2.0kb downstream 2.0kb downstream 5983 true Bd5: 13662174-13668156 Brachypodium distachyon
Bradi5g10310 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13662174-13664173 Brachypodium distachyon
Bradi5g10310 5.0kb upstream 5.0kb upstream 8983 true Bd5: 13664174-13673156 Brachypodium distachyon
Bradi5g10310 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13668157-13673156 Brachypodium distachyon
Bradi5g10310 5.0kb downstream 5.0kb downstream 8983 true Bd5: 13659174-13668156 Brachypodium distachyon
Bradi5g10310 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13659174-13664173 Brachypodium distachyon
Bradi5g10310 10.0kb upstream 10.0kb upstream 13983 true Bd5: 13664174-13678156 Brachypodium distachyon
Bradi5g10310 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13668157-13678156 Brachypodium distachyon
Bradi5g10310 10.0kb downstream 10.0kb downstream 13983 true Bd5: 13654174-13668156 Brachypodium distachyon
Bradi5g10310 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13654174-13664173 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585048 5269 Grass View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.642        
cufflinks 1.09        
cufflinks 1.109       High
cufflinks 1.338       High
cufflinks 0.321       Low
cufflinks 0.811        
cufflinks 0.885        
cufflinks 0.675        
cufflinks 0.765        
cufflinks 0.979        
cufflinks 0.475        
cufflinks 0.622        
cufflinks 0.534        
cufflinks 0.462        
cufflinks 0.582        
cufflinks 0.772        
cufflinks 0.665        
cufflinks 1.085        
cufflinks 0.887        
cufflinks 0.235       Low
cufflinks 0.881        
cufflinks 0.798        
cufflinks 0.566        
cufflinks 0.605        
cufflinks 0.817        
cufflinks 1.192       High
cufflinks 0.531        
cufflinks 1.218       High
cufflinks 1.016        
cufflinks 0.654        

0 Strain