Gene : Bradi1g70165 B. distachyon v3.1
Defline:  (1 of 1) PTHR12919:SF22 - 30S RIBOSOMAL PROTEIN S16, CHLOROPLASTIC Genomic Order:  8876
Name:  ? Bradi1g70165 Secondary Identifier:  ? PAC:32802568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g70165 0.5kb upstream 0.5kb upstream 1155 true Bd1: 68797830-68798984 Brachypodium distachyon
Bradi1g70165 0.5kb upstream 0.5kb upstream 500 false Bd1: 68797830-68798329 Brachypodium distachyon
Bradi1g70165 0.5kb downstream 0.5kb downstream 1155 true Bd1: 68798330-68799484 Brachypodium distachyon
Bradi1g70165 0.5kb downstream 0.5kb downstream 500 false Bd1: 68798985-68799484 Brachypodium distachyon
Bradi1g70165 1.0kb upstream 1.0kb upstream 1655 true Bd1: 68797330-68798984 Brachypodium distachyon
Bradi1g70165 1.0kb upstream 1.0kb upstream 1000 false Bd1: 68797330-68798329 Brachypodium distachyon
Bradi1g70165 1.0kb downstream 1.0kb downstream 1655 true Bd1: 68798330-68799984 Brachypodium distachyon
Bradi1g70165 1.0kb downstream 1.0kb downstream 1000 false Bd1: 68798985-68799984 Brachypodium distachyon
Bradi1g70165 2.0kb upstream 2.0kb upstream 2655 true Bd1: 68796330-68798984 Brachypodium distachyon
Bradi1g70165 2.0kb upstream 2.0kb upstream 2000 false Bd1: 68796330-68798329 Brachypodium distachyon
Bradi1g70165 2.0kb downstream 2.0kb downstream 2655 true Bd1: 68798330-68800984 Brachypodium distachyon
Bradi1g70165 2.0kb downstream 2.0kb downstream 2000 false Bd1: 68798985-68800984 Brachypodium distachyon
Bradi1g70165 5.0kb upstream 5.0kb upstream 5655 true Bd1: 68793330-68798984 Brachypodium distachyon
Bradi1g70165 5.0kb upstream 5.0kb upstream 5000 false Bd1: 68793330-68798329 Brachypodium distachyon
Bradi1g70165 5.0kb downstream 5.0kb downstream 5655 true Bd1: 68798330-68803984 Brachypodium distachyon
Bradi1g70165 5.0kb downstream 5.0kb downstream 5000 false Bd1: 68798985-68803984 Brachypodium distachyon
Bradi1g70165 10.0kb upstream 10.0kb upstream 10655 true Bd1: 68788330-68798984 Brachypodium distachyon
Bradi1g70165 10.0kb upstream 10.0kb upstream 10000 false Bd1: 68788330-68798329 Brachypodium distachyon
Bradi1g70165 10.0kb downstream 10.0kb downstream 10655 true Bd1: 68798330-68808984 Brachypodium distachyon
Bradi1g70165 10.0kb downstream 10.0kb downstream 10000 false Bd1: 68798985-68808984 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029145 5273 Angiosperm View MSA
124568898 5269 Grass View MSA
121298528 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low  
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.02     Low Low
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.092       High
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.094     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain