Gene : Bradi5g09940 B. distachyon v3.1
Defline:  (1 of 10) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  1024
Name:  ? Bradi5g09940 Secondary Identifier:  ? PAC:32807804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g09940 0.5kb upstream 0.5kb upstream 4077 true Bd5: 13354636-13358712 Brachypodium distachyon
Bradi5g09940 0.5kb upstream 0.5kb upstream 500 false Bd5: 13354636-13355135 Brachypodium distachyon
Bradi5g09940 0.5kb downstream 0.5kb downstream 4077 true Bd5: 13355136-13359212 Brachypodium distachyon
Bradi5g09940 0.5kb downstream 0.5kb downstream 500 false Bd5: 13358713-13359212 Brachypodium distachyon
Bradi5g09940 1.0kb upstream 1.0kb upstream 4577 true Bd5: 13354136-13358712 Brachypodium distachyon
Bradi5g09940 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13354136-13355135 Brachypodium distachyon
Bradi5g09940 1.0kb downstream 1.0kb downstream 4577 true Bd5: 13355136-13359712 Brachypodium distachyon
Bradi5g09940 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13358713-13359712 Brachypodium distachyon
Bradi5g09940 2.0kb upstream 2.0kb upstream 5577 true Bd5: 13353136-13358712 Brachypodium distachyon
Bradi5g09940 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13353136-13355135 Brachypodium distachyon
Bradi5g09940 2.0kb downstream 2.0kb downstream 5577 true Bd5: 13355136-13360712 Brachypodium distachyon
Bradi5g09940 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13358713-13360712 Brachypodium distachyon
Bradi5g09940 5.0kb upstream 5.0kb upstream 8577 true Bd5: 13350136-13358712 Brachypodium distachyon
Bradi5g09940 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13350136-13355135 Brachypodium distachyon
Bradi5g09940 5.0kb downstream 5.0kb downstream 8577 true Bd5: 13355136-13363712 Brachypodium distachyon
Bradi5g09940 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13358713-13363712 Brachypodium distachyon
Bradi5g09940 10.0kb upstream 10.0kb upstream 13577 true Bd5: 13345136-13358712 Brachypodium distachyon
Bradi5g09940 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13345136-13355135 Brachypodium distachyon
Bradi5g09940 10.0kb downstream 10.0kb downstream 13577 true Bd5: 13355136-13368712 Brachypodium distachyon
Bradi5g09940 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13358713-13368712 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575122 5269 Grass View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.24     High  
cufflinks 25.651     High  
cufflinks 23.902     High  
cufflinks 37.341     High High
cufflinks 7.45        
cufflinks 17.474     High  
cufflinks 18.872     High  
cufflinks 18.925     High  
cufflinks 17.501     High  
cufflinks 23.935     High  
cufflinks 9.096     High  
cufflinks 15.485     High  
cufflinks 12.925     High  
cufflinks 12.38     High  
cufflinks 30.27     High  
cufflinks 18.017     High  
cufflinks 23.077     High  
cufflinks 2.106       Low
cufflinks 7.393        
cufflinks 2.062       Low
cufflinks 7.784        
cufflinks 19.004     High  
cufflinks 19.782     High  
cufflinks 19.745     High  
cufflinks 21.075     High  
cufflinks 32.341     High  
cufflinks 13.387     High  
cufflinks 27.397     High  
cufflinks 26.193     High  
cufflinks 12.316     High  

0 Strain