Gene : Bradi1g70720 B. distachyon v3.1
Defline:  (1 of 5) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  8946
Name:  ? Bradi1g70720 Secondary Identifier:  ? PAC:32793651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g70720 0.5kb upstream 0.5kb upstream 3571 true Bd1: 69130323-69133893 Brachypodium distachyon
Bradi1g70720 0.5kb upstream 0.5kb upstream 500 false Bd1: 69130323-69130822 Brachypodium distachyon
Bradi1g70720 0.5kb downstream 0.5kb downstream 3571 true Bd1: 69130823-69134393 Brachypodium distachyon
Bradi1g70720 0.5kb downstream 0.5kb downstream 500 false Bd1: 69133894-69134393 Brachypodium distachyon
Bradi1g70720 1.0kb upstream 1.0kb upstream 4071 true Bd1: 69129823-69133893 Brachypodium distachyon
Bradi1g70720 1.0kb upstream 1.0kb upstream 1000 false Bd1: 69129823-69130822 Brachypodium distachyon
Bradi1g70720 1.0kb downstream 1.0kb downstream 4071 true Bd1: 69130823-69134893 Brachypodium distachyon
Bradi1g70720 1.0kb downstream 1.0kb downstream 1000 false Bd1: 69133894-69134893 Brachypodium distachyon
Bradi1g70720 2.0kb upstream 2.0kb upstream 5071 true Bd1: 69128823-69133893 Brachypodium distachyon
Bradi1g70720 2.0kb upstream 2.0kb upstream 2000 false Bd1: 69128823-69130822 Brachypodium distachyon
Bradi1g70720 2.0kb downstream 2.0kb downstream 5071 true Bd1: 69130823-69135893 Brachypodium distachyon
Bradi1g70720 2.0kb downstream 2.0kb downstream 2000 false Bd1: 69133894-69135893 Brachypodium distachyon
Bradi1g70720 5.0kb upstream 5.0kb upstream 8071 true Bd1: 69125823-69133893 Brachypodium distachyon
Bradi1g70720 5.0kb upstream 5.0kb upstream 5000 false Bd1: 69125823-69130822 Brachypodium distachyon
Bradi1g70720 5.0kb downstream 5.0kb downstream 8071 true Bd1: 69130823-69138893 Brachypodium distachyon
Bradi1g70720 5.0kb downstream 5.0kb downstream 5000 false Bd1: 69133894-69138893 Brachypodium distachyon
Bradi1g70720 10.0kb upstream 10.0kb upstream 13071 true Bd1: 69120823-69133893 Brachypodium distachyon
Bradi1g70720 10.0kb upstream 10.0kb upstream 10000 false Bd1: 69120823-69130822 Brachypodium distachyon
Bradi1g70720 10.0kb downstream 10.0kb downstream 13071 true Bd1: 69130823-69143893 Brachypodium distachyon
Bradi1g70720 10.0kb downstream 10.0kb downstream 10000 false Bd1: 69133894-69143893 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574608 5269 Grass View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558        
cufflinks 0.652        
cufflinks 1.0       High
cufflinks 0.739        
cufflinks 0.405       Low
cufflinks 0.572        
cufflinks 0.659        
cufflinks 0.5       Low
cufflinks 0.62        
cufflinks 0.91        
cufflinks 0.756        
cufflinks 0.605        
cufflinks 0.614        
cufflinks 0.627        
cufflinks 0.603        
cufflinks 0.605        
cufflinks 0.439       Low
cufflinks 0.94        
cufflinks 0.898        
cufflinks 0.717        
cufflinks 1.177       High
cufflinks 0.964        
cufflinks 0.609        
cufflinks 0.527       Low
cufflinks 0.6        
cufflinks 1.345       High
cufflinks 0.989        
cufflinks 1.22       High
cufflinks 1.002       High
cufflinks 1.053       High

0 Strain