Gene : Bradi1g77217 B. distachyon v3.1
Defline:  (1 of 8) PTHR31989:SF6 - F12P19.8 PROTEIN Genomic Order:  9688
Name:  ? Bradi1g77217 Secondary Identifier:  ? PAC:32798287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g77217 0.5kb upstream 0.5kb upstream 5528 true Bd1: 73827497-73833024 Brachypodium distachyon
Bradi1g77217 0.5kb upstream 0.5kb upstream 500 false Bd1: 73832525-73833024 Brachypodium distachyon
Bradi1g77217 0.5kb downstream 0.5kb downstream 5528 true Bd1: 73826997-73832524 Brachypodium distachyon
Bradi1g77217 0.5kb downstream 0.5kb downstream 500 false Bd1: 73826997-73827496 Brachypodium distachyon
Bradi1g77217 1.0kb upstream 1.0kb upstream 6028 true Bd1: 73827497-73833524 Brachypodium distachyon
Bradi1g77217 1.0kb upstream 1.0kb upstream 1000 false Bd1: 73832525-73833524 Brachypodium distachyon
Bradi1g77217 1.0kb downstream 1.0kb downstream 6028 true Bd1: 73826497-73832524 Brachypodium distachyon
Bradi1g77217 1.0kb downstream 1.0kb downstream 1000 false Bd1: 73826497-73827496 Brachypodium distachyon
Bradi1g77217 2.0kb upstream 2.0kb upstream 7028 true Bd1: 73827497-73834524 Brachypodium distachyon
Bradi1g77217 2.0kb upstream 2.0kb upstream 2000 false Bd1: 73832525-73834524 Brachypodium distachyon
Bradi1g77217 2.0kb downstream 2.0kb downstream 7028 true Bd1: 73825497-73832524 Brachypodium distachyon
Bradi1g77217 2.0kb downstream 2.0kb downstream 2000 false Bd1: 73825497-73827496 Brachypodium distachyon
Bradi1g77217 5.0kb upstream 5.0kb upstream 10028 true Bd1: 73827497-73837524 Brachypodium distachyon
Bradi1g77217 5.0kb upstream 5.0kb upstream 5000 false Bd1: 73832525-73837524 Brachypodium distachyon
Bradi1g77217 5.0kb downstream 5.0kb downstream 10028 true Bd1: 73822497-73832524 Brachypodium distachyon
Bradi1g77217 5.0kb downstream 5.0kb downstream 5000 false Bd1: 73822497-73827496 Brachypodium distachyon
Bradi1g77217 10.0kb upstream 10.0kb upstream 15028 true Bd1: 73827497-73842524 Brachypodium distachyon
Bradi1g77217 10.0kb upstream 10.0kb upstream 10000 false Bd1: 73832525-73842524 Brachypodium distachyon
Bradi1g77217 10.0kb downstream 10.0kb downstream 15028 true Bd1: 73817497-73832524 Brachypodium distachyon
Bradi1g77217 10.0kb downstream 10.0kb downstream 10000 false Bd1: 73817497-73827496 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578992 5269 Grass View MSA
122045532 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.572        
cufflinks 0.655        
cufflinks 0.666        
cufflinks 0.453        
cufflinks 0.472        
cufflinks 0.459        
cufflinks 0.614        
cufflinks 0.422        
cufflinks 0.516        
cufflinks 0.507        
cufflinks 0.013     Low Low
cufflinks 0.479        
cufflinks 0.072       Low
cufflinks 0.004     Low Low
cufflinks 0.332        
cufflinks 0.732        
cufflinks 0.171        
cufflinks 1.31       High
cufflinks 0.198     Low  
cufflinks 0.117     Low  
cufflinks 0.667        
cufflinks 0.681        
cufflinks 0.395        
cufflinks 0.418        
cufflinks 0.395        
cufflinks 0.641        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.622        
cufflinks 0.668        
cufflinks 1.359       High

0 Strain