Gene : Bradi1g77867 B. distachyon v3.1
Defline:  (1 of 4) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  9774
Name:  ? Bradi1g77867 Secondary Identifier:  ? PAC:32804257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g77867 0.5kb upstream 0.5kb upstream 3069 true Bd1: 74245178-74248246 Brachypodium distachyon
Bradi1g77867 0.5kb upstream 0.5kb upstream 500 false Bd1: 74247747-74248246 Brachypodium distachyon
Bradi1g77867 0.5kb downstream 0.5kb downstream 3069 true Bd1: 74244678-74247746 Brachypodium distachyon
Bradi1g77867 0.5kb downstream 0.5kb downstream 500 false Bd1: 74244678-74245177 Brachypodium distachyon
Bradi1g77867 1.0kb upstream 1.0kb upstream 3569 true Bd1: 74245178-74248746 Brachypodium distachyon
Bradi1g77867 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74247747-74248746 Brachypodium distachyon
Bradi1g77867 1.0kb downstream 1.0kb downstream 3569 true Bd1: 74244178-74247746 Brachypodium distachyon
Bradi1g77867 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74244178-74245177 Brachypodium distachyon
Bradi1g77867 2.0kb upstream 2.0kb upstream 4569 true Bd1: 74245178-74249746 Brachypodium distachyon
Bradi1g77867 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74247747-74249746 Brachypodium distachyon
Bradi1g77867 2.0kb downstream 2.0kb downstream 4569 true Bd1: 74243178-74247746 Brachypodium distachyon
Bradi1g77867 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74243178-74245177 Brachypodium distachyon
Bradi1g77867 5.0kb upstream 5.0kb upstream 7569 true Bd1: 74245178-74252746 Brachypodium distachyon
Bradi1g77867 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74247747-74252746 Brachypodium distachyon
Bradi1g77867 5.0kb downstream 5.0kb downstream 7569 true Bd1: 74240178-74247746 Brachypodium distachyon
Bradi1g77867 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74240178-74245177 Brachypodium distachyon
Bradi1g77867 10.0kb upstream 10.0kb upstream 12569 true Bd1: 74245178-74257746 Brachypodium distachyon
Bradi1g77867 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74247747-74257746 Brachypodium distachyon
Bradi1g77867 10.0kb downstream 10.0kb downstream 12569 true Bd1: 74235178-74247746 Brachypodium distachyon
Bradi1g77867 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74235178-74245177 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582680 5269 Grass View MSA
122046147 5273 Angiosperm View MSA
121347118 5274 Embryophyte View MSA
123426547 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.119     High  
cufflinks 7.52        
cufflinks 6.247        
cufflinks 11.372     High  
cufflinks 15.729     High  
cufflinks 17.042     High  
cufflinks 10.013     High  
cufflinks 33.652     High  
cufflinks 27.41     High  
cufflinks 45.506     High  
cufflinks 24.398     High  
cufflinks 25.583     High  
cufflinks 32.064     High  
cufflinks 36.342     High  
cufflinks 45.961     High  
cufflinks 14.562     High  
cufflinks 36.026     High  
cufflinks 0.158       Low
cufflinks 6.366        
cufflinks 6.413        
cufflinks 8.499        
cufflinks 36.694     High  
cufflinks 34.517     High  
cufflinks 30.917     High  
cufflinks 22.224     High  
cufflinks 11.936     High  
cufflinks 30.518     High  
cufflinks 17.735     High  
cufflinks 29.738     High  
cufflinks 5.136        

0 Strain