Gene : Bradi5g07870 B. distachyon v3.1
Defline:  (1 of 2) PF04359 - Protein of unknown function (DUF493) (DUF493) Genomic Order:  751
Name:  ? Bradi5g07870 Secondary Identifier:  ? PAC:32807063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g07870 0.5kb upstream 0.5kb upstream 4478 true Bd5: 10590285-10594762 Brachypodium distachyon
Bradi5g07870 0.5kb upstream 0.5kb upstream 500 false Bd5: 10590285-10590784 Brachypodium distachyon
Bradi5g07870 0.5kb downstream 0.5kb downstream 4478 true Bd5: 10590785-10595262 Brachypodium distachyon
Bradi5g07870 0.5kb downstream 0.5kb downstream 500 false Bd5: 10594763-10595262 Brachypodium distachyon
Bradi5g07870 1.0kb upstream 1.0kb upstream 4978 true Bd5: 10589785-10594762 Brachypodium distachyon
Bradi5g07870 1.0kb upstream 1.0kb upstream 1000 false Bd5: 10589785-10590784 Brachypodium distachyon
Bradi5g07870 1.0kb downstream 1.0kb downstream 4978 true Bd5: 10590785-10595762 Brachypodium distachyon
Bradi5g07870 1.0kb downstream 1.0kb downstream 1000 false Bd5: 10594763-10595762 Brachypodium distachyon
Bradi5g07870 2.0kb upstream 2.0kb upstream 5978 true Bd5: 10588785-10594762 Brachypodium distachyon
Bradi5g07870 2.0kb upstream 2.0kb upstream 2000 false Bd5: 10588785-10590784 Brachypodium distachyon
Bradi5g07870 2.0kb downstream 2.0kb downstream 5978 true Bd5: 10590785-10596762 Brachypodium distachyon
Bradi5g07870 2.0kb downstream 2.0kb downstream 2000 false Bd5: 10594763-10596762 Brachypodium distachyon
Bradi5g07870 5.0kb upstream 5.0kb upstream 8978 true Bd5: 10585785-10594762 Brachypodium distachyon
Bradi5g07870 5.0kb upstream 5.0kb upstream 5000 false Bd5: 10585785-10590784 Brachypodium distachyon
Bradi5g07870 5.0kb downstream 5.0kb downstream 8978 true Bd5: 10590785-10599762 Brachypodium distachyon
Bradi5g07870 5.0kb downstream 5.0kb downstream 5000 false Bd5: 10594763-10599762 Brachypodium distachyon
Bradi5g07870 10.0kb upstream 10.0kb upstream 13978 true Bd5: 10580785-10594762 Brachypodium distachyon
Bradi5g07870 10.0kb upstream 10.0kb upstream 10000 false Bd5: 10580785-10590784 Brachypodium distachyon
Bradi5g07870 10.0kb downstream 10.0kb downstream 13978 true Bd5: 10590785-10604762 Brachypodium distachyon
Bradi5g07870 10.0kb downstream 10.0kb downstream 10000 false Bd5: 10594763-10604762 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588166 5269 Grass View MSA
122048054 5273 Angiosperm View MSA
121348978 5274 Embryophyte View MSA
123426420 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.421     High  
cufflinks 30.897     High High
cufflinks 13.295     High  
cufflinks 29.936     High High
cufflinks 13.765     High  
cufflinks 19.808     High  
cufflinks 31.081     High High
cufflinks 8.1       Low
cufflinks 11.397     High  
cufflinks 12.442     High  
cufflinks 17.429     High  
cufflinks 13.288     High  
cufflinks 19.726     High  
cufflinks 20.027     High  
cufflinks 8.287       Low
cufflinks 19.578     High  
cufflinks 17.691     High  
cufflinks 4.068       Low
cufflinks 40.125     High High
cufflinks 31.106     High High
cufflinks 13.316     High  
cufflinks 8.54       Low
cufflinks 8.623       Low
cufflinks 15.307     High  
cufflinks 27.115     High  
cufflinks 17.042     High  
cufflinks 24.647     High  
cufflinks 15.446     High  
cufflinks 12.625     High  
cufflinks 14.289     High  

0 Strain