Gene : Bradi1g78070 B. distachyon v3.1
Defline:  (1 of 2) K09595 - minor histocompatibility antigen H13 [EC:3.4.23.-] (HM13) Genomic Order:  9803
Name:  ? Bradi1g78070 Secondary Identifier:  ? PAC:32800929
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g78070 0.5kb upstream 0.5kb upstream 5479 true Bd1: 74386058-74391536 Brachypodium distachyon
Bradi1g78070 0.5kb upstream 0.5kb upstream 500 false Bd1: 74391037-74391536 Brachypodium distachyon
Bradi1g78070 0.5kb downstream 0.5kb downstream 5479 true Bd1: 74385558-74391036 Brachypodium distachyon
Bradi1g78070 0.5kb downstream 0.5kb downstream 500 false Bd1: 74385558-74386057 Brachypodium distachyon
Bradi1g78070 1.0kb upstream 1.0kb upstream 5979 true Bd1: 74386058-74392036 Brachypodium distachyon
Bradi1g78070 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74391037-74392036 Brachypodium distachyon
Bradi1g78070 1.0kb downstream 1.0kb downstream 5979 true Bd1: 74385058-74391036 Brachypodium distachyon
Bradi1g78070 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74385058-74386057 Brachypodium distachyon
Bradi1g78070 2.0kb upstream 2.0kb upstream 6979 true Bd1: 74386058-74393036 Brachypodium distachyon
Bradi1g78070 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74391037-74393036 Brachypodium distachyon
Bradi1g78070 2.0kb downstream 2.0kb downstream 6979 true Bd1: 74384058-74391036 Brachypodium distachyon
Bradi1g78070 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74384058-74386057 Brachypodium distachyon
Bradi1g78070 5.0kb upstream 5.0kb upstream 9979 true Bd1: 74386058-74396036 Brachypodium distachyon
Bradi1g78070 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74391037-74396036 Brachypodium distachyon
Bradi1g78070 5.0kb downstream 5.0kb downstream 9979 true Bd1: 74381058-74391036 Brachypodium distachyon
Bradi1g78070 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74381058-74386057 Brachypodium distachyon
Bradi1g78070 10.0kb upstream 10.0kb upstream 14979 true Bd1: 74386058-74401036 Brachypodium distachyon
Bradi1g78070 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74391037-74401036 Brachypodium distachyon
Bradi1g78070 10.0kb downstream 10.0kb downstream 14979 true Bd1: 74376058-74391036 Brachypodium distachyon
Bradi1g78070 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74376058-74386057 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584629 5269 Grass View MSA
122042427 5273 Angiosperm View MSA
121351308 5274 Embryophyte View MSA
123428175 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.814     High  
cufflinks 9.303        
cufflinks 8.058        
cufflinks 7.973        
cufflinks 5.85        
cufflinks 8.125        
cufflinks 8.308        
cufflinks 8.916        
cufflinks 8.457        
cufflinks 6.048        
cufflinks 5.503        
cufflinks 6.614        
cufflinks 4.454       Low
cufflinks 4.797       Low
cufflinks 6.888        
cufflinks 9.19        
cufflinks 10.774        
cufflinks 15.757     High High
cufflinks 14.742     High High
cufflinks 2.827       Low
cufflinks 11.268     High High
cufflinks 6.799        
cufflinks 8.232        
cufflinks 7.964        
cufflinks 7.672        
cufflinks 8.222        
cufflinks 7.868        
cufflinks 7.949        
cufflinks 7.588        
cufflinks 8.643        

0 Strain